RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 SRMSQ9H3Y6 488 aa14.3□□□□□ -0.12
USP43-202ENST00000570475 PAK6Q9NQU5 681 aaPredicted RBP14.3□□□□□ -0.12
USP43-202ENST00000570475 MRPL39Q9NYK5 338 aaKnown RBP14.3□□□□□ -0.12
USP43-202ENST00000570475 GNG8Q9UK08 70 aa14.3□□□□□ -0.12
USP43-202ENST00000570475 RANBP2P49792 3224 aaKnown RBP14.3□□□□□ -0.12
USP43-202ENST00000570475 E9PI62 339 aa14.3□□□□□ -0.12
USP43-202ENST00000570475 MAN2B1O00754 1011 aa14.3□□□□□ -0.12
USP43-202ENST00000570475 OR10H2O60403 315 aa14.3□□□□□ -0.12
USP43-202ENST00000570475 HCN1O60741 890 aa14.3□□□□□ -0.12
USP43-202ENST00000570475 BNC1Q01954 994 aa14.3□□□□□ -0.12
USP43-202ENST00000570475 TPBGQ13641 420 aa14.3□□□□□ -0.12
USP43-202ENST00000570475 LILRA6Q6PI73 481 aa14.3□□□□□ -0.12
USP43-202ENST00000570475 LINC00471Q8N535 108 aa14.3□□□□□ -0.12
USP43-202ENST00000570475 PELI2Q9HAT8 420 aa14.3□□□□□ -0.12
USP43-202ENST00000570475 BABAM2Q9NXR7 383 aa14.3□□□□□ -0.12
USP43-202ENST00000570475 SPEF1Q9Y4P9 236 aa14.3□□□□□ -0.12
USP43-202ENST00000570475 HEATR5BQ9P2D3 2071 aa14.3□□□□□ -0.12
USP43-202ENST00000570475 MN1Q10571 1320 aaPredicted RBP14.29□□□□□ -0.12
USP43-202ENST00000570475 TEX13CA0A0J9YWL9 993 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 C17orf113A0A1B0GUU1 675 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 ANKRD61A6NGH8 418 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 UNC119BA6NIH7 251 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 PEX12O00623 359 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 PRKNO60260 465 aaPredicted RBP14.29□□□□□ -0.12
USP43-202ENST00000570475 LILRB5O75023 590 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 RGS9O75916 674 aaPredicted RBP14.29□□□□□ -0.12
USP43-202ENST00000570475 ALX3O95076 343 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 PVRP15151 417 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 TEAD1P28347 426 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 SOX2P48431 317 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 RAB14P61106 215 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 CDK5Q00535 292 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 REEP5Q00765 189 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 E2F1Q01094 437 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 TRMT12Q53H54 448 aaKnown RBP14.29□□□□□ -0.12
USP43-202ENST00000570475 RFPL4BQ6ZWI9 263 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 GATSQ8NAP1 163 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 OR2A1Q8NGT9 310 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 ELP4Q96EB1 424 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 SLC35A4Q96G79 324 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 PTCHD1Q96NR3 888 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 CCDC3Q9BQI4 270 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 SLC25A18Q9H1K4 315 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 SLC38A1Q9H2H9 487 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 RPS6KB2Q9UBS0 482 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 DSPPQ9NZW4 1301 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 EIF4EP06730 217 aaKnown RBP14.29□□□□□ -0.12
USP43-202ENST00000570475 SLC35G6P0C7Q6 338 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 GABRA3P34903 492 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 VSX2P58304 361 aaPredicted RBP14.29□□□□□ -0.12
USP43-202ENST00000570475 ZNF155Q12901 538 aaPredicted RBP14.29□□□□□ -0.12
USP43-202ENST00000570475 ZNF322Q6U7Q0 402 aaPredicted RBP14.29□□□□□ -0.12
USP43-202ENST00000570475 CHMP1BQ7LBR1 199 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 OAFQ86UD1 273 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 LRRC56Q8IYG6 542 aaPredicted RBP14.29□□□□□ -0.12
USP43-202ENST00000570475 SLC44A3Q8N4M1 653 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 NATD1Q8N6N6 113 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 MORN4Q8NDC4 146 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 OTUB2Q96DC9 234 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 HCAR1Q9BXC0 346 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 MKRN2Q9H000 416 aaKnown RBP14.29□□□□□ -0.12
USP43-202ENST00000570475 ENKD1Q9H0I2 346 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 SERGEFQ9UGK8 458 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 PLXND1Q9Y4D7 1925 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 CENPVL1A0A0U1RR11 272 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 TMEM129A0AVI4 362 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 RNF13O43567 381 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 KHDRBS3O75525 346 aaKnown RBP14.29□□□□□ -0.12
USP43-202ENST00000570475 PAPLNO95428 1278 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 STOMP27105 288 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 SF3A2Q15428 464 aaKnown RBP14.29□□□□□ -0.12
USP43-202ENST00000570475 ZNF542PQ5EBM4 170 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 HES5Q5TA89 166 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 METRNLQ641Q3 311 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 ABHD17CQ6PCB6 329 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 LYPD4Q6UWN0 246 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 SDR9C7Q8NEX9 313 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 WFIKKN2Q8TEU8 576 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 TSACCQ96A04 125 aaPredicted RBP14.29□□□□□ -0.12
USP43-202ENST00000570475 MS4A6EQ96DS6 147 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 ERMAPQ96PL5 475 aaPredicted RBP14.29□□□□□ -0.12
USP43-202ENST00000570475 CCDC86Q9H6F5 360 aaKnown RBP14.29□□□□□ -0.12
USP43-202ENST00000570475 CALML5Q9NZT1 146 aa14.29□□□□□ -0.12
USP43-202ENST00000570475 TRDV1A0A1B0GX56 115 aa14.28□□□□□ -0.12
USP43-202ENST00000570475 A0A1W2PQU0 124 aa14.28□□□□□ -0.12
USP43-202ENST00000570475 SLC9B1P1A6NJY1 282 aa14.28□□□□□ -0.12
USP43-202ENST00000570475 ZNF780AO75290 641 aaPredicted RBP14.28□□□□□ -0.12
USP43-202ENST00000570475 MOSPD3O75425 235 aa14.28□□□□□ -0.12
USP43-202ENST00000570475 MT-ND5P03915 603 aa14.28□□□□□ -0.12
USP43-202ENST00000570475 BMP8BP34820 402 aa14.28□□□□□ -0.12
USP43-202ENST00000570475 MLLT3P42568 568 aaPredicted RBP14.28□□□□□ -0.12
USP43-202ENST00000570475 GZMKP49863 264 aa14.28□□□□□ -0.12
USP43-202ENST00000570475 IRF4Q15306 451 aa14.28□□□□□ -0.12
USP43-202ENST00000570475 SLC25A35Q3KQZ1 300 aa14.28□□□□□ -0.12
USP43-202ENST00000570475 BMP8AQ7Z5Y6 402 aa14.28□□□□□ -0.12
USP43-202ENST00000570475 RDH10Q8IZV5 341 aa14.28□□□□□ -0.12
USP43-202ENST00000570475 OR52E2Q8NGJ4 325 aa14.28□□□□□ -0.12
USP43-202ENST00000570475 MSANTD3Q96H12 275 aa14.28□□□□□ -0.12
USP43-202ENST00000570475 TMEM43Q9BTV4 400 aa14.28□□□□□ -0.12
USP43-202ENST00000570475 FN3KQ9H479 309 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms