RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 MYBPC1Q00872 1141 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 TNFRSF17Q02223 184 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 GNA12Q03113 381 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 ZFP36L1Q07352 338 aaKnown RBP2.89□□□□□ -1.95
CNOT1-221ENST00000569924 KIF5AQ12840 1032 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 GAGE1Q13065 139 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 GAGE4Q13068 117 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 NME3Q13232 169 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 HNF4GQ14541 408 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 ELOCQ15369 112 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 ANKRD55Q3KP44 614 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 ADPRMQ3LIE5 342 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 SLC25A52Q3SY17 297 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 TMEM35AQ53FP2 167 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 PHLDA2Q53GA4 152 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 CMPK2Q5EBM0 449 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 ARMCX4Q5H9R4 360 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 TPRG1LQ5T0D9 272 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 NDUFAF5Q5TEU4 345 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 FAM69BQ5VUD6 431 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 OTUD1Q5VV17 481 aaPredicted RBP2.89□□□□□ -1.95
CNOT1-221ENST00000569924 NKAIN2Q5VXU1 208 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 OR4A47Q6IF82 309 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 UGT3A1Q6NUS8 523 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 LRRC8BQ6P9F7 803 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 TRIM65Q6PJ69 517 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 FAM183BPQ6ZVS7 135 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 ARCQ7LC44 396 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 BNIPLQ7Z465 357 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 TMEM139Q8IV31 216 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 GPALPP1Q8IXQ4 340 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 PRSS35Q8N3Z0 413 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 LRRC17Q8N6Y2 441 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 TMEM99Q8N816 258 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 TRIM58Q8NG06 486 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 OR6C4Q8NGE1 309 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 OR10Q1Q8NGQ4 319 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 NELFBQ8WX92 580 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 METTL21AQ8WXB1 218 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 TSACCQ96A04 125 aaPredicted RBP2.89□□□□□ -1.95
CNOT1-221ENST00000569924 LGALS12Q96DT0 336 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 ZNF48Q96MX3 618 aaPredicted RBP2.89□□□□□ -1.95
CNOT1-221ENST00000569924 ZNF607Q96SK3 696 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 NPY6RQ99463 290 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 CCDC3Q9BQI4 270 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 CCDC77Q9BR77 488 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 ALKBH7Q9BT30 221 aaPredicted RBP2.89□□□□□ -1.95
CNOT1-221ENST00000569924 BDH2Q9BUT1 245 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 LRRC61Q9BV99 259 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 ZYG11BQ9C0D3 744 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 THAP2Q9H0W7 228 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 ADNPQ9H2P0 1102 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 TCEAL2Q9H3H9 227 aaPredicted RBP2.89□□□□□ -1.95
CNOT1-221ENST00000569924 WDR76Q9H967 626 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 MARCH7Q9H992 704 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 UBE2TQ9NPD8 197 aaPredicted RBP2.89□□□□□ -1.95
CNOT1-221ENST00000569924 ACP6Q9NPH0 428 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 DDX18Q9NVP1 670 aaKnown RBP2.89□□□□□ -1.95
CNOT1-221ENST00000569924 SPHK1Q9NYA1 384 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 APOBEC3BQ9UH17 382 aaKnown RBP2.89□□□□□ -1.95
CNOT1-221ENST00000569924 TEKT2Q9UIF3 430 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 DAPK2Q9UIK4 370 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 STAP1Q9ULZ2 295 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 SPACA6W5XKT8 324 aa2.89□□□□□ -1.95
CNOT1-221ENST00000569924 BOD1L1Q8NFC6 3051 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 LRP4O75096 1905 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 ZCWPW2A0A1B0GU75 182 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 A0A1W2PRB8 838 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 CLEC18AA5D8T8 446 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 GOLGA6L4A6NEF3 574 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 LINC01548A6NM66 108 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 CHUKO15111 745 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 CASC3O15234 703 aaKnown RBP2.88□□□□□ -1.95
CNOT1-221ENST00000569924 SYT7O43581 403 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 ERLIN1O75477 346 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 CLN5O75503 358 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 KDM4BO94953 1096 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 OR4F21O95013 312 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 SYNGR4O95473 234 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 FGFR1OPO95684 399 aaKnown RBP2.88□□□□□ -1.95
CNOT1-221ENST00000569924 POP4O95707 220 aaKnown RBP2.88□□□□□ -1.95
CNOT1-221ENST00000569924 CPNE6O95741 557 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 LSM8O95777 96 aaKnown RBP2.88□□□□□ -1.95
CNOT1-221ENST00000569924 EPOP01588 193 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 CYP1A2P05177 515 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 RPLP0P05388 317 aaKnown RBP2.88□□□□□ -1.95
CNOT1-221ENST00000569924 TFAP2AP05549 437 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 UGT2B4P06133 528 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 APRTP07741 180 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 F3P13726 295 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 GM2AP17900 193 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 POLR2CP19387 275 aaPredicted RBP2.88□□□□□ -1.95
CNOT1-221ENST00000569924 PAICSP22234 425 aaKnown RBP2.88□□□□□ -1.95
CNOT1-221ENST00000569924 CALB2P22676 271 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 CBLP22681 906 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 DPP4P27487 766 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 SRD5A2P31213 254 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 PRDX2P32119 198 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 CDH5P33151 784 aaPredicted RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms