RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 AP4B1Q9Y6B7 739 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 KCNE3Q9Y6H6 103 aa12.42□□□□□ -0.42
GTF3C1-211ENST00000569653 NPIPA5A0A0B4J1W7 369 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 A0A0J9YW62 118 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 A0A1W2PRB8 838 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 NPIPA7E9PJI5 369 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 GOSR1O95249 250 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 KCNH1O95259 989 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 THBDP07204 575 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 FGF4P08620 206 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 NPIPA8P0DM63 369 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 CD8BP10966 210 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 LAMP1P11279 417 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 TBXA2RP21731 343 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 CRYGSP22914 178 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 ETV4P43268 484 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 SERPINB4P48594 390 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 PCYT1AP49585 367 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 PRIM2P49643 509 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 DIO3P55073 304 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 MANFP55145 182 aaKnown RBP12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 PPP2R2AP63151 447 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 PTGR1Q14914 329 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 ANKRD34AQ69YU3 496 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 OR2A2Q6IF42 318 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 KRTCAP2Q8N6L1 136 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 CDS1Q92903 461 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 ZBED6CLQ96FA7 236 aaPredicted RBP12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 SH3YL1Q96HL8 342 aaPredicted RBP12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 C1orf50Q9BV19 199 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 TMEM185BQ9H7F4 350 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 CXorf36Q9H7Y0 433 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 PTGES2Q9H7Z7 377 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 MED17Q9NVC6 651 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 ATP6V1HQ9UI12 483 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 TRAF6Q9Y4K3 522 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 CADP27708 2225 aa12.41□□□□□ -0.42
GTF3C1-211ENST00000569653 CSPG4Q6UVK1 2322 aa12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 ABCA2Q9BZC7 2435 aa12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 TTC36A6NLP5 189 aa12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 EIF1AYO14602 144 aaKnown RBP12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 SCAMP2O15127 329 aaKnown RBP12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 HMGN2P05204 90 aaKnown RBP12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 ZNF17P17021 662 aa12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 EIF1AXP47813 144 aaKnown RBP12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 EEF1A1P68104 462 aaKnown RBP12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 NDUFAF6Q330K2 333 aa12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 KRTAP21-3Q3LHN1 58 aa12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 EEF1A1P5Q5VTE0 462 aa12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 CHMP1BQ7LBR1 199 aa12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 SZRD1Q7Z422 152 aa12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 NUDCD3Q8IVD9 361 aa12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 DDIASQ8IXT1 998 aa12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 GTPBP8Q8N3Z3 284 aaPredicted RBP12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 OR10D3Q8NH80 312 aa12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 ZFP28Q8NHY6 868 aa12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 ARSGQ96EG1 525 aa12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 RNF145Q96MT1 663 aa12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 SERHL2Q9H4I8 314 aa12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 C3orf14Q9HBI5 128 aa12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 GPATCH2Q9NW75 528 aa12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 ZDHHC2Q9UIJ5 367 aa12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 MRTO4Q9UKD2 239 aaKnown RBP12.4□□□□□ -0.42
GTF3C1-211ENST00000569653 C7orf72A4D263 438 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 LINC01387J3KSC0 135 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 ADAMDEC1O15204 470 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 BIRC5O15392 142 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 NDUFB5O43674 189 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 CXCL13O43927 109 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 PEX11AO75192 247 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 LINGO3P0C6S8 592 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 POU2F1P14859 743 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 PSMD4P55036 377 aaKnown RBP12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 EEFSECP57772 596 aaKnown RBP12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 ZNF117Q03924 483 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 FOXF1Q12946 379 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 LASP1Q14847 261 aaKnown RBP12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 MLC1Q15049 377 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 C6orf136Q5SQH8 315 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 CBLN3Q6UW01 205 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 Q71RC1 249 aaPredicted RBP12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 FAM214BQ7L5A3 538 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 COX18Q8N8Q8 333 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 CEP70Q8NHQ1 597 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 MTERF3Q96E29 417 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 DTNBP1Q96EV8 351 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 PIK3IP1Q96FE7 263 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 ZC3HAV1LQ96H79 300 aaKnown RBP12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 PKNOX2Q96KN3 472 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 ZNF395Q9H8N7 513 aaPredicted RBP12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 KCNK9Q9NPC2 374 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 ZCCHC3Q9NUD5 404 aaKnown RBP12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 GIN1Q9NXP7 522 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 NDRG3Q9UGV2 375 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 TMED5Q9Y3A6 229 aa12.39□□□□□ -0.43
GTF3C1-211ENST00000569653 NPIPB9F8W1W9 429 aa12.38□□□□□ -0.43
GTF3C1-211ENST00000569653 C16orf97H3BN30 126 aa12.38□□□□□ -0.43
GTF3C1-211ENST00000569653 TNFSF11O14788 317 aa12.38□□□□□ -0.43
GTF3C1-211ENST00000569653 SS18L1O75177 396 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms