RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 TIGARQ9NQ88 270 aa5.66□□□□□ -1.5
HERPUD1-217ENST00000569429 KLHL9Q9P2J3 617 aa5.66□□□□□ -1.5
HERPUD1-217ENST00000569429 ZNF490Q9ULM2 529 aaPredicted RBP5.66□□□□□ -1.5
HERPUD1-217ENST00000569429 GPR55Q9Y2T6 319 aaPredicted RBP5.66□□□□□ -1.5
HERPUD1-217ENST00000569429 COMMD10Q9Y6G5 202 aa5.66□□□□□ -1.5
HERPUD1-217ENST00000569429 ALMS1Q8TCU4 4167 aa5.66□□□□□ -1.5
HERPUD1-217ENST00000569429 IGLV3-32A0A0A0MS00 114 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 A0A1W2PS29 197 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 C7orf72A4D263 438 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 VSTM5A8MXK1 200 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 H0YL77 283 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 NDUFB5O43674 189 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 SCO2O43819 266 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 FADS1O60427 444 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 IGHV2-5P01817 119 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 HPXP02790 462 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 OPN1LWP04000 364 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 SFTPBP07988 381 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 COMTP21964 271 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 FEN1P39748 380 aaKnown RBP5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 SSR2P43308 183 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 NAP1L1P55209 391 aaKnown RBP5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 PSPHP78330 225 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 SLC25A3Q00325 362 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 REP15Q6BDI9 236 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 VHLLQ6RSH7 139 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 LARP4Q71RC2 724 aaKnown RBP eCLIP5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 RETREG3Q86VR2 466 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 WDFY1Q8IWB7 410 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 MYO1HQ8N1T3 1032 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 ZCCHC7Q8N3Z6 543 aaKnown RBP5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 CEP112Q8N8E3 955 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 NUP37Q8NFH4 326 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 UHMK1Q8TAS1 419 aaKnown RBP5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 YIPF5Q969M3 257 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 MFSD3Q96ES6 412 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 KLHL15Q96M94 604 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 FAM118BQ9BPY3 351 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 KCNS3Q9BQ31 491 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 KATNB1Q9BVA0 655 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 PACSIN1Q9BY11 444 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 MS4A8Q9BY19 250 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 CHIAQ9BZP6 476 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 RTN4RQ9BZR6 473 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 TPK1Q9H3S4 243 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 EHD1Q9H4M9 534 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 CXorf36Q9H7Y0 433 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 SAYSD1Q9NPB0 183 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 SLC17A5Q9NRA2 495 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 SLC6A13Q9NSD5 602 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 FAM120CQ9NX05 1096 aaKnown RBP5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 PRODH2Q9UF12 536 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 BCAP29Q9UHQ4 241 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 ZNF639Q9UID6 485 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 EFR3BQ9Y2G0 817 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 HYOU1Q9Y4L1 999 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 AUP1Q9Y679 476 aa5.65□□□□□ -1.5
HERPUD1-217ENST00000569429 UBR4Q5T4S7 5183 aa5.65□□□□□ -1.51
HERPUD1-217ENST00000569429 DNAH10Q8IVF4 4471 aa5.65□□□□□ -1.51
HERPUD1-217ENST00000569429 SH3PXD2BA1X283 911 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 MACROD2A1Z1Q3 448 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 GLOD5A6NK44 160 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 ZNF724A8MTY0 619 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 PIP5K1BO14986 540 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 SPOPO43791 374 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 RP2O75695 350 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 CRYAAP02489 173 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 SERPING1P05155 500 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 GSNP06396 782 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 ITGA5P08648 1049 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 ADRA2AP08913 450 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 ENO2P09104 434 aaPredicted RBP5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 CT45A8P0DMV1 189 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 CT45A9P0DMV2 189 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 NR2F6P10588 404 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 LYL1P12980 280 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 EPB42P16452 691 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 NPR2P20594 1047 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 ENPP1P22413 925 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 ME2P23368 584 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 PIK3R1P27986 724 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 IL12BP29460 328 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 KRT20P35900 424 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 EMDP50402 254 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 MANFP55145 182 aaKnown RBP5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 PRPS1P60891 318 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 COPS2P61201 443 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 MRPS22P82650 360 aaKnown RBP5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 MGAT2Q10469 447 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 DCTN2Q13561 401 aaKnown RBP5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 PRICKLE4Q2TBC4 344 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 CT45A2Q5DJT8 189 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 OR4C11Q6IEV9 310 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 ZNF620Q6ZNG0 422 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 SPATA21Q7Z572 469 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 ZNF100Q8IYN0 542 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 SAMD14Q8IZD0 417 aaPredicted RBP5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 CDK20Q8IZL9 346 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 FAM71DQ8N9W8 422 aa5.64□□□□□ -1.51
HERPUD1-217ENST00000569429 SLC16A11Q8NCK7 471 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms