RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 SDR9C7Q8NEX9 313 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 OR2A1Q8NGT9 310 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 SUN5Q8TC36 379 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 SETD7Q8WTS6 366 aaKnown RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 SLC35A4Q96G79 324 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 METTL2AQ96IZ6 378 aaKnown RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 ARHGAP9Q9BRR9 750 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 C1QTNF6Q9BXI9 259 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 SLC6A20Q9NP91 592 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 EIF3KQ9UBQ5 218 aaKnown RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 GTF2A1LQ9UNN4 478 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 FLVCR2Q9UPI3 526 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 EXOSC1Q9Y3B2 195 aaKnown RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 PLXNB3Q9ULL4 1909 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 NOTCH4Q99466 2003 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 TCF20Q9UGU0 1960 aaKnown RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 EDDM13A0A1B0GTR0 161 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 CIB4A0PJX0 185 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 I3L521 148 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 NOS1APO75052 506 aaPredicted RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 GATBO75879 557 aaKnown RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 ACADMP11310 421 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 LAMP2P13473 410 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 CPMP14384 443 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 POLR2CP19387 275 aaPredicted RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 NDUFV2P19404 249 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 ZNF81P51508 661 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 LIMK1P53667 647 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 PRDX1Q06830 199 aaKnown RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 RPA4Q13156 261 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 MAB21L1Q13394 359 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 MAPK14Q16539 360 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 FAM209AQ5JX71 171 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 HES5Q5TA89 166 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 PRPF38BQ5VTL8 546 aaKnown RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 THSD4Q6ZMP0 1018 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 CHMP1BQ7LBR1 199 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 PARGQ86W56 976 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 LRRC17Q8N6Y2 441 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 CLDN22Q8N7P3 220 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 OR7G1Q8NGA0 311 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 ZNF431Q8TF32 576 aaPredicted RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 PATE1Q8WXA2 126 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 RFKQ969G6 155 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 TSACCQ96A04 125 aaPredicted RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 RFT1Q96AA3 541 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 TRIM43Q96BQ3 446 aaPredicted RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 MS4A6EQ96DS6 147 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 ZNF514Q96K75 400 aaPredicted RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 NANSQ9NR45 359 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 PPIEQ9UNP9 301 aaKnown RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 TRAPPC4Q9Y296 219 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 A0A0A6YYJ9 748 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 SLC9B1P1A6NJY1 282 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 A8MVJ9 347 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 RGS13O14921 159 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 CHST10O43529 356 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 ICMTO60725 284 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 RASGRP1O95267 797 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 EML2O95834 649 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 GSTM3P21266 225 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 RAB28P51157 221 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 OC90Q02509 493 aaPredicted RBP8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 TSPAN31Q12999 210 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 CRMP1Q14194 572 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 DUSP5Q16690 384 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 PUS10Q3MIT2 529 aaKnown RBP8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 ZNF628Q5EBL2 1059 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 ZNF322Q6U7Q0 402 aaPredicted RBP8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 LINGO2Q7L985 606 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 NRSN1Q8IZ57 195 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 AKAP1Q92667 903 aaKnown RBP eCLIP8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 PMM1Q92871 262 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 FOXN4Q96NZ1 517 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 PDCD1LG2Q9BQ51 273 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 BTBD1Q9H0C5 482 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 UBQLN3Q9H347 655 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 TAS2R7Q9NYW3 318 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 ICKQ9UPZ9 632 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 REV3LO60673 3130 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 HEATR5BQ9P2D3 2071 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 SURF4O15260 269 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 RNF13O43567 381 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 RAD1O60671 282 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 LILRB3O75022 631 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 THY1P04216 161 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 CXCL3P19876 107 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 MAKP20794 623 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 RPL4P36578 427 aaKnown RBP8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 RPS27P42677 84 aaKnown RBP8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 SOX2P48431 317 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 RRAS2P62070 204 aaPredicted RBP8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 ABATP80404 500 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 DGCR2P98153 550 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 ZNF267Q14586 743 aaPredicted RBP8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 SUZ12Q15022 739 aaKnown RBP8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 FAM78AQ5JUQ0 283 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 TMEM201Q5SNT2 666 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 BHLHB9Q6PI77 547 aa8.35□□□□□ -1.07
HDGFL3-206ENST00000568294 TMEM91Q6ZNR0 172 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms