RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 HGDQ93099 445 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 TMBIM1Q969X1 311 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 SARAFQ96BY9 339 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 SLC35A4Q96G79 324 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 AURKBQ96GD4 344 aaPredicted RBP12.28□□□□□ -0.44
CLK3-218ENST00000566926 CCDC120Q96HB5 630 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 TMEM41AQ96HV5 264 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 VKORC1Q9BQB6 163 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 TP63Q9H3D4 680 aaPredicted RBP12.28□□□□□ -0.44
CLK3-218ENST00000566926 IKZF5Q9H5V7 419 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 TMEM38AQ9H6F2 299 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 ZNF703Q9H7S9 590 aaPredicted RBP12.28□□□□□ -0.44
CLK3-218ENST00000566926 CXorf36Q9H7Y0 433 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 ANKRA2Q9H9E1 313 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 Q9N2J8 555 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 ACKR4Q9NPB9 350 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 SIRT3Q9NTG7 399 aaPredicted RBP12.28□□□□□ -0.44
CLK3-218ENST00000566926 KLRF1Q9NZS2 232 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 MEMO1Q9Y316 297 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 TRGV5A0A0B4J1U4 118 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 DUXAA6NLW8 204 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 ARPC2O15144 300 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 UGT2B11O75310 529 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 ENTPD5O75356 428 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 GPIP06744 558 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 C8BP07358 591 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 RNF224P0DH78 156 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 UMPSP11172 480 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 EFNA1P20827 205 aaPredicted RBP12.27□□□□□ -0.45
CLK3-218ENST00000566926 AGAP20933 346 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 GDF1P27539 372 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 PRIM2P49643 509 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 KHKP50053 298 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 GZMMP51124 257 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 TP53BP2Q13625 1128 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 SELPLGQ14242 412 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 DECR1Q16698 335 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 ZNF630Q2M218 657 aaPredicted RBP12.27□□□□□ -0.45
CLK3-218ENST00000566926 VMACQ2NL98 169 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 GCNT6Q5T4J0 391 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 ZCCHC12Q6PEW1 402 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 CD163Q86VB7 1156 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 IFNEQ86WN2 208 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 FAM156AQ8NDB6 213 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 OR1J4Q8NGS1 313 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 MIPOL1Q8TD10 442 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 RSRC1Q96IZ7 334 aaKnown RBP12.27□□□□□ -0.45
CLK3-218ENST00000566926 NSMCE2Q96MF7 247 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 RNF145Q96MT1 663 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 MS4A4EQ96PG1 132 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 OSBPL11Q9BXB4 747 aa12.27□□□□□ -0.45
CLK3-218ENST00000566926 ZCCHC3Q9NUD5 404 aaKnown RBP12.27□□□□□ -0.45
CLK3-218ENST00000566926 FAF1Q9UNN5 650 aaPredicted RBP12.27□□□□□ -0.45
CLK3-218ENST00000566926 A1L4Q6 167 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 PRAMEF25A6NGN4 478 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 LRRC3CA6NJW4 275 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 FIGNL2A6NMB9 653 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 NPIPA2E9PIF3 369 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 NPIPA3F8WFD2 350 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 TSPAN2O60636 221 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 ICOSLGO75144 302 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 TNFRSF21O75509 655 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 PSMG1O95456 288 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 PSMA4P25789 261 aaKnown RBP12.26□□□□□ -0.45
CLK3-218ENST00000566926 PCGF2P35227 344 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 CRATP43155 626 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 CDK9P50750 372 aaKnown RBP12.26□□□□□ -0.45
CLK3-218ENST00000566926 PSG6Q00889 435 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 MS4A2Q01362 244 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 CCNIQ14094 377 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 WLSQ5T9L3 541 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 BICRALQ6AI39 1079 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 TIGD3Q6B0B8 471 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 NPSR1Q6W5P4 371 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 C6orf120Q7Z4R8 191 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 FGD2Q7Z6J4 655 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 MRGPRGQ86SM5 289 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 SPATA24Q86W54 205 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 RNF130Q86XS8 419 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 CDRT4Q8N9R6 151 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 NUP43Q8NFH3 380 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 SLC26A7Q8TE54 656 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 DUS3LQ96G46 650 aaKnown RBP12.26□□□□□ -0.45
CLK3-218ENST00000566926 SLC35G5Q96KT7 338 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 NODALQ96S42 347 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 ADOQ96SZ5 270 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 LMF2Q9BU23 707 aaKnown RBP12.26□□□□□ -0.45
CLK3-218ENST00000566926 TRIM8Q9BZR9 551 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 PCDHAC1Q9H158 963 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 PACSIN3Q9UKS6 424 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 ACAD8Q9UKU7 415 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 CBLCQ9ULV8 474 aa12.26□□□□□ -0.45
CLK3-218ENST00000566926 PCNX3Q9H6A9 2034 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 CACNA1DQ01668 2161 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 TCRBV3S1A0A5B6 114 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 CXCR6O00574 342 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 SNPHO15079 494 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 CBR3O75828 277 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 TRAPPC6AO75865 159 aa12.25□□□□□ -0.45
CLK3-218ENST00000566926 ATP6V1G2O95670 118 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms