RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 THY1P04216 161 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 CHRM5P08912 532 aaPredicted RBP15.6■□□□□ 0.09
CMTM3-213ENST00000566756 HOXB3P14651 431 aaPredicted RBP15.6■□□□□ 0.09
CMTM3-213ENST00000566756 NDUFS1P28331 727 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 PTGER1P34995 402 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 CD79BP40259 229 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 MTNR1BP49286 362 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 CCR5P51681 352 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 PDX1P52945 283 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 RAB8AP61006 207 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 RGS1Q08116 209 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 SF3A2Q15428 464 aaKnown RBP15.6■□□□□ 0.09
CMTM3-213ENST00000566756 RPL13AP3Q6NVV1 102 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 SHFQ7M4L6 423 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 MEX3DQ86XN8 651 aaKnown RBP15.6■□□□□ 0.09
CMTM3-213ENST00000566756 OR2L13Q8N349 312 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 TMEM145Q8NBT3 493 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 WDR92Q96MX6 357 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 OR2M4Q96R27 311 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 SECISBP2Q96T21 854 aaKnown RBP15.6■□□□□ 0.09
CMTM3-213ENST00000566756 SLX1AQ9BQ83 275 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 TMEM43Q9BTV4 400 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 RERGLQ9H628 205 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 INPP5EQ9NRR6 644 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 PTGFRNQ9P2B2 879 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 GPSM3Q9Y4H4 160 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 LRP4O75096 1905 aa15.59■□□□□ 0.09
CMTM3-213ENST00000566756 A0A1W2PS29 197 aa15.59■□□□□ 0.09
CMTM3-213ENST00000566756 FAM25AB3EWG3 89 aa15.59■□□□□ 0.09
CMTM3-213ENST00000566756 FAM25CB3EWG5 89 aa15.59■□□□□ 0.09
CMTM3-213ENST00000566756 FAM25GB3EWG6 89 aa15.59■□□□□ 0.09
CMTM3-213ENST00000566756 FAM157BP0CG42 384 aa15.59■□□□□ 0.09
CMTM3-213ENST00000566756 CELP19835 753 aa15.59■□□□□ 0.09
CMTM3-213ENST00000566756 APEX1P27695 318 aaKnown RBP15.59■□□□□ 0.09
CMTM3-213ENST00000566756 AKT2P31751 481 aa15.59■□□□□ 0.09
CMTM3-213ENST00000566756 SOX18P35713 384 aa15.59■□□□□ 0.09
CMTM3-213ENST00000566756 CLDN2P57739 230 aa15.59■□□□□ 0.09
CMTM3-213ENST00000566756 TNFRSF17Q02223 184 aa15.59■□□□□ 0.09
CMTM3-213ENST00000566756 TJAP1Q5JTD0 557 aa15.59■□□□□ 0.09
CMTM3-213ENST00000566756 VASNQ6EMK4 673 aa15.59■□□□□ 0.09
CMTM3-213ENST00000566756 FAM20CQ8IXL6 584 aa15.59■□□□□ 0.09
CMTM3-213ENST00000566756 SPRYD4Q8WW59 207 aaPredicted RBP15.59■□□□□ 0.09
CMTM3-213ENST00000566756 OTULINQ96BN8 352 aa15.59■□□□□ 0.09
CMTM3-213ENST00000566756 KCTD12Q96CX2 325 aaKnown RBP15.59■□□□□ 0.09
CMTM3-213ENST00000566756 EVA1AQ9H8M9 152 aa15.59■□□□□ 0.09
CMTM3-213ENST00000566756 SPHK1Q9NYA1 384 aa15.59■□□□□ 0.09
CMTM3-213ENST00000566756 MOSPD1Q9UJG1 213 aa15.59■□□□□ 0.09
CMTM3-213ENST00000566756 MRPS17Q9Y2R5 130 aaKnown RBP15.59■□□□□ 0.09
CMTM3-213ENST00000566756 WDR45Q9Y484 360 aa15.59■□□□□ 0.09
CMTM3-213ENST00000566756 EYSQ5T1H1 3165 aa15.59■□□□□ 0.09
CMTM3-213ENST00000566756 A0A0B4J293 547 aa15.58■□□□□ 0.09
CMTM3-213ENST00000566756 LINC00854A0A1B0GVQ3 168 aa15.58■□□□□ 0.09
CMTM3-213ENST00000566756 OR52A4PA6NMU1 304 aa15.58■□□□□ 0.09
CMTM3-213ENST00000566756 FCMRO60667 390 aa15.58■□□□□ 0.09
CMTM3-213ENST00000566756 HPGDSO60760 199 aa15.58■□□□□ 0.09
CMTM3-213ENST00000566756 RGS9O75916 674 aaPredicted RBP15.58■□□□□ 0.09
CMTM3-213ENST00000566756 STATHP02808 62 aa15.58■□□□□ 0.09
CMTM3-213ENST00000566756 IFI6P09912 130 aa15.58■□□□□ 0.09
CMTM3-213ENST00000566756 GPR4P46093 362 aa15.58■□□□□ 0.09
CMTM3-213ENST00000566756 CAPZA2P47755 286 aa15.58■□□□□ 0.09
CMTM3-213ENST00000566756 EEF1A1P68104 462 aaKnown RBP15.58■□□□□ 0.09
CMTM3-213ENST00000566756 BTN3A2P78410 334 aa15.58■□□□□ 0.09
CMTM3-213ENST00000566756 TRAM1Q15629 374 aa15.58■□□□□ 0.09
CMTM3-213ENST00000566756 CXXC5Q7LFL8 322 aaKnown RBP15.58■□□□□ 0.09
CMTM3-213ENST00000566756 RANBP3LQ86VV4 465 aaPredicted RBP15.58■□□□□ 0.09
CMTM3-213ENST00000566756 PMM1Q92871 262 aa15.58■□□□□ 0.09
CMTM3-213ENST00000566756 RNF31Q96EP0 1072 aa15.58■□□□□ 0.09
CMTM3-213ENST00000566756 TMED9Q9BVK6 235 aa15.58■□□□□ 0.09
CMTM3-213ENST00000566756 UBQLN3Q9H347 655 aa15.58■□□□□ 0.09
CMTM3-213ENST00000566756 LMAN1LQ9HAT1 526 aa15.58■□□□□ 0.09
CMTM3-213ENST00000566756 HINT3Q9NQE9 182 aaKnown RBP15.58■□□□□ 0.09
CMTM3-213ENST00000566756 NUFIP1Q9UHK0 495 aaKnown RBP15.58■□□□□ 0.09
CMTM3-213ENST00000566756 FMO6PO60774 539 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 CH25HO95992 272 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 FOSL2P15408 326 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 RPS4Y1P22090 263 aaKnown RBP15.58■□□□□ 0.08
CMTM3-213ENST00000566756 NUDT1P36639 197 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 GCGRP47871 477 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 ZNF136P52737 540 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 CLDN20P56880 219 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 FZD5Q13467 585 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 LTB4RQ15722 352 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 EXOSC6Q5RKV6 272 aaKnown RBP15.58■□□□□ 0.08
CMTM3-213ENST00000566756 ENPP7Q6UWV6 458 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 ZNF836Q6ZNA1 936 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 TRILQ7L0X0 811 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 VN1R4Q7Z5H5 301 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 ASPGQ86U10 573 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 ACBD7Q8N6N7 88 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 ZFP41Q8N8Y5 198 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 SLC16A11Q8NCK7 471 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 OR7G2Q8NG99 324 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 GRPEL2Q8TAA5 225 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 TMEM255BQ8WV15 326 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 KAT2AQ92830 837 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 SLC22A18Q96BI1 424 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 SERINC2Q96SA4 455 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 MARVELD1Q9BSK0 173 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 HDHD5Q9BXW7 423 aa15.58■□□□□ 0.08
CMTM3-213ENST00000566756 RNF32Q9H0A6 362 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms