RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 LSM1O15116 133 aaKnown RBP13.42□□□□□ -0.26
RNF40-209ENST00000566703 KLF4O43474 513 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 CXCL13O43927 109 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 SHBGP04278 402 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 PABPC4LP0CB38 370 aaKnown RBP13.42□□□□□ -0.26
RNF40-209ENST00000566703 PAX1P15863 534 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 KRT4P19013 534 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 ME2P23368 584 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 RPL3P39023 403 aaKnown RBP13.42□□□□□ -0.26
RNF40-209ENST00000566703 ZNF41P51814 821 aaPredicted RBP13.42□□□□□ -0.26
RNF40-209ENST00000566703 NR1H2P55055 460 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 DUSP5Q16690 384 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 EXOC3L2Q2M3D2 409 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 PLPPR5Q32ZL2 321 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 ANKRD34AQ69YU3 496 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 FIGNL1Q6PIW4 674 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 STAC2Q6ZMT1 411 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 C22orf34Q6ZV56 151 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 PLEKHM3Q6ZWE6 761 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 MTERF4Q7Z6M4 381 aaKnown RBP13.42□□□□□ -0.26
RNF40-209ENST00000566703 YTHDF3Q7Z739 585 aaKnown RBP13.42□□□□□ -0.26
RNF40-209ENST00000566703 PPP1R14CQ8TAE6 165 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 OSTF1Q92882 214 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 ZC3HAV1LQ96H79 300 aaKnown RBP13.42□□□□□ -0.26
RNF40-209ENST00000566703 HS3ST6Q96QI5 342 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 STACQ99469 402 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 BTBD2Q9BX70 525 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 HOXD1Q9GZZ0 328 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 PIGUQ9H490 435 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 DUSP22Q9NRW4 184 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 BAIAP2L1Q9UHR4 511 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 ATP6V1HQ9UI12 483 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 PTGDR2Q9Y5Y4 395 aa13.42□□□□□ -0.26
RNF40-209ENST00000566703 PCNX3Q9H6A9 2034 aa13.41□□□□□ -0.26
RNF40-209ENST00000566703 A0A0J9YW62 118 aa13.41□□□□□ -0.26
RNF40-209ENST00000566703 TMEM114B3SHH9 223 aa13.41□□□□□ -0.26
RNF40-209ENST00000566703 GMFGO60234 142 aa13.41□□□□□ -0.26
RNF40-209ENST00000566703 LY6G6DO95868 133 aa13.41□□□□□ -0.26
RNF40-209ENST00000566703 THBDP07204 575 aa13.41□□□□□ -0.26
RNF40-209ENST00000566703 LINC00032P0C843 101 aa13.41□□□□□ -0.26
RNF40-209ENST00000566703 BCKDHAP12694 445 aa13.41□□□□□ -0.26
RNF40-209ENST00000566703 PSMB1P20618 241 aaKnown RBP13.41□□□□□ -0.26
RNF40-209ENST00000566703 ADH6P28332 368 aa13.41□□□□□ -0.26
RNF40-209ENST00000566703 CARD18P57730 90 aa13.41□□□□□ -0.26
RNF40-209ENST00000566703 POU6F2P78424 691 aaPredicted RBP13.41□□□□□ -0.26
RNF40-209ENST00000566703 KANK2Q63ZY3 851 aa13.41□□□□□ -0.26
RNF40-209ENST00000566703 HBMQ6B0K9 141 aa13.41□□□□□ -0.26
RNF40-209ENST00000566703 ZAR1Q86SH2 424 aa13.41□□□□□ -0.26
RNF40-209ENST00000566703 COX18Q8N8Q8 333 aa13.41□□□□□ -0.26
RNF40-209ENST00000566703 B4GALNT2Q8NHY0 566 aa13.41□□□□□ -0.26
RNF40-209ENST00000566703 UBLCP1Q8WVY7 318 aaPredicted RBP13.41□□□□□ -0.26
RNF40-209ENST00000566703 IGFBPL1Q8WX77 278 aa13.41□□□□□ -0.26
RNF40-209ENST00000566703 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.41□□□□□ -0.26
RNF40-209ENST00000566703 C16orf58Q96GQ5 468 aa13.41□□□□□ -0.26
RNF40-209ENST00000566703 Q96MF0 132 aa13.41□□□□□ -0.26
RNF40-209ENST00000566703 RNF145Q96MT1 663 aa13.41□□□□□ -0.26
RNF40-209ENST00000566703 HDHD5Q9BXW7 423 aa13.41□□□□□ -0.26
RNF40-209ENST00000566703 C12orf65Q9H3J6 166 aaKnown RBP13.41□□□□□ -0.26
RNF40-209ENST00000566703 GP6Q9HCN6 339 aa13.41□□□□□ -0.26
RNF40-209ENST00000566703 TIGARQ9NQ88 270 aa13.41□□□□□ -0.26
RNF40-209ENST00000566703 TRAF6Q9Y4K3 522 aa13.41□□□□□ -0.26
RNF40-209ENST00000566703 NF1P21359 2839 aa13.4□□□□□ -0.26
RNF40-209ENST00000566703 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.4□□□□□ -0.26
RNF40-209ENST00000566703 H7C1Q1 480 aa13.4□□□□□ -0.26
RNF40-209ENST00000566703 NPHS1O60500 1241 aa13.4□□□□□ -0.26
RNF40-209ENST00000566703 TUBBP07437 444 aa13.4□□□□□ -0.26
RNF40-209ENST00000566703 LINGO3P0C6S8 592 aa13.4□□□□□ -0.26
RNF40-209ENST00000566703 ELK4P28324 431 aa13.4□□□□□ -0.26
RNF40-209ENST00000566703 MAPK1P28482 360 aa13.4□□□□□ -0.26
RNF40-209ENST00000566703 SUMO3P55854 103 aaPredicted RBP13.4□□□□□ -0.26
RNF40-209ENST00000566703 RPL38P63173 70 aaKnown RBP13.4□□□□□ -0.26
RNF40-209ENST00000566703 PCLAFQ15004 111 aa13.4□□□□□ -0.26
RNF40-209ENST00000566703 UGT3A2Q3SY77 523 aa13.4□□□□□ -0.26
RNF40-209ENST00000566703 PPP4R4Q6NUP7 873 aa13.4□□□□□ -0.26
RNF40-209ENST00000566703 Q71RC1 249 aaPredicted RBP13.4□□□□□ -0.26
RNF40-209ENST00000566703 SZRD1Q7Z422 152 aa13.4□□□□□ -0.26
RNF40-209ENST00000566703 GALNT10Q86SR1 603 aa13.4□□□□□ -0.26
RNF40-209ENST00000566703 LILRA2Q8N149 483 aa13.4□□□□□ -0.26
RNF40-209ENST00000566703 GATSQ8NAP1 163 aa13.4□□□□□ -0.26
RNF40-209ENST00000566703 POC1BQ8TC44 478 aa13.4□□□□□ -0.26
RNF40-209ENST00000566703 OR5P2Q8WZ92 322 aa13.4□□□□□ -0.26
RNF40-209ENST00000566703 FAM120BQ96EK7 910 aaKnown RBP13.4□□□□□ -0.26
RNF40-209ENST00000566703 PPP3R2Q96LZ3 170 aa13.4□□□□□ -0.26
RNF40-209ENST00000566703 KLHL15Q96M94 604 aa13.4□□□□□ -0.26
RNF40-209ENST00000566703 NPAS1Q99742 590 aa13.4□□□□□ -0.26
RNF40-209ENST00000566703 USB1Q9BQ65 265 aaKnown RBP13.4□□□□□ -0.26
RNF40-209ENST00000566703 EML4Q9HC35 981 aaKnown RBP13.4□□□□□ -0.26
RNF40-209ENST00000566703 SIRT3Q9NTG7 399 aaPredicted RBP13.4□□□□□ -0.26
RNF40-209ENST00000566703 ZCCHC3Q9NUD5 404 aaKnown RBP13.4□□□□□ -0.26
RNF40-209ENST00000566703 ZNF701Q9NV72 531 aaPredicted RBP13.4□□□□□ -0.26
RNF40-209ENST00000566703 FBXO34Q9NWN3 711 aa13.4□□□□□ -0.26
RNF40-209ENST00000566703 MKS1Q9NXB0 559 aa13.4□□□□□ -0.26
RNF40-209ENST00000566703 CLEC4AQ9UMR7 237 aa13.4□□□□□ -0.26
RNF40-209ENST00000566703 ACTL7BQ9Y614 415 aa13.4□□□□□ -0.26
RNF40-209ENST00000566703 NAV3Q8IVL0 2385 aa13.4□□□□□ -0.26
RNF40-209ENST00000566703 GJE1A6NN92 205 aa13.39□□□□□ -0.27
RNF40-209ENST00000566703 H3BNH8 94 aa13.39□□□□□ -0.27
RNF40-209ENST00000566703 TNFSF11O14788 317 aa13.39□□□□□ -0.27
RNF40-209ENST00000566703 LYPLA1O75608 230 aaPredicted RBP13.39□□□□□ -0.27
RNF40-209ENST00000566703 HMGN2P05204 90 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms