RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 CSTF3Q12996 717 aaKnown RBP11.36□□□□□ -0.59
RNF40-208ENST00000565995 HEPACAMQ14CZ8 416 aa11.36□□□□□ -0.59
RNF40-208ENST00000565995 KRTAP24-1Q3LI83 254 aa11.36□□□□□ -0.59
RNF40-208ENST00000565995 APOOLQ6UXV4 268 aa11.36□□□□□ -0.59
RNF40-208ENST00000565995 TIFABQ6ZNK6 161 aa11.36□□□□□ -0.59
RNF40-208ENST00000565995 ESPNLQ6ZVH7 1005 aa11.36□□□□□ -0.59
RNF40-208ENST00000565995 GALNT10Q86SR1 603 aa11.36□□□□□ -0.59
RNF40-208ENST00000565995 FAM9CQ8IZT9 166 aa11.36□□□□□ -0.59
RNF40-208ENST00000565995 TMEM151AQ8N4L1 468 aa11.36□□□□□ -0.59
RNF40-208ENST00000565995 PIWIL2Q8TC59 973 aaKnown RBP11.36□□□□□ -0.59
RNF40-208ENST00000565995 ACMSDQ8TDX5 336 aa11.36□□□□□ -0.59
RNF40-208ENST00000565995 ACTRT2Q8TDY3 377 aa11.36□□□□□ -0.59
RNF40-208ENST00000565995 HOXB13Q92826 284 aaPredicted RBP11.36□□□□□ -0.59
RNF40-208ENST00000565995 EXOSC8Q96B26 276 aaKnown RBP11.36□□□□□ -0.59
RNF40-208ENST00000565995 APOPT1Q96IL0 206 aa11.36□□□□□ -0.59
RNF40-208ENST00000565995 LMF2Q9BU23 707 aaKnown RBP11.36□□□□□ -0.59
RNF40-208ENST00000565995 GP6Q9HCN6 339 aa11.36□□□□□ -0.59
RNF40-208ENST00000565995 KCNK9Q9NPC2 374 aa11.36□□□□□ -0.59
RNF40-208ENST00000565995 FBXO34Q9NWN3 711 aa11.36□□□□□ -0.59
RNF40-208ENST00000565995 MRTO4Q9UKD2 239 aaKnown RBP11.36□□□□□ -0.59
RNF40-208ENST00000565995 CLEC4AQ9UMR7 237 aa11.36□□□□□ -0.59
RNF40-208ENST00000565995 A0A0J9YW62 118 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 GOLGA8QA0A0J9YX86 632 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 A0A1W2PP18 115 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 SERTM1A2A2V5 107 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 GOLGA8OA6NCC3 632 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 ELOA3DA6NLF2 546 aaPredicted RBP11.35□□□□□ -0.59
RNF40-208ENST00000565995 TTC36A6NLP5 189 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 GOLGA8NF8WBI6 632 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 GPRIN2O60269 458 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 NDUFS7O75251 213 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 GLRA3O75311 464 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 SPAG7O75391 227 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 ESRRBO95718 433 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 ANGPTL1O95841 491 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 NGFRP08138 427 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 COL6A2P12110 1019 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 MAP3K8P41279 467 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 LOXL1Q08397 574 aaPredicted RBP11.35□□□□□ -0.59
RNF40-208ENST00000565995 STX5Q13190 355 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 TAB1Q15750 504 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 NRF1Q16656 503 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 ELOA3BQ3SY89 546 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 CPTPQ5TA50 214 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 FIGNL1Q6PIW4 674 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 OR2L13Q8N349 312 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 ELOA3Q8NG57 546 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.35□□□□□ -0.59
RNF40-208ENST00000565995 C16orf78Q8WTQ4 265 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 NEUROG1Q92886 237 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 ZBTB8AQ96BR9 441 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 TNFRSF13CQ96RJ3 184 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 PFDN4Q9NQP4 134 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 GIMAP4Q9NUV9 329 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 XPR1Q9UBH6 696 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 GDF2Q9UK05 429 aaPredicted RBP11.35□□□□□ -0.59
RNF40-208ENST00000565995 GRID1Q9ULK0 1009 aa11.35□□□□□ -0.59
RNF40-208ENST00000565995 DPRXA6NFQ7 191 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 SHISA8B8ZZ34 492 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 ALG1L2C9J202 215 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 UPK1AO00322 258 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 MANBAO00462 879 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 CXCL13O43927 109 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 PCDH7O60245 1069 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 SMIM24O75264 130 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 SYNGR4O95473 234 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 SBK3P0C264 359 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 PABPC4LP0CB38 370 aaKnown RBP11.34□□□□□ -0.59
RNF40-208ENST00000565995 CCT5P48643 541 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 DSCR9P59020 149 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 VLDLRP98155 873 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 P2RY6Q15077 328 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 PRSS53Q2L4Q9 553 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 TSNAXIP1Q2TAA8 658 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 TMEM249Q2WGJ8 235 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 SPIN4Q56A73 249 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 TFAP2EQ6VUC0 442 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 RPS27LQ71UM5 84 aaKnown RBP11.34□□□□□ -0.59
RNF40-208ENST00000565995 CCDC63Q8NA47 563 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 OR2V1Q8NHB1 315 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 RNF128Q8TEB7 428 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 TLCD1Q96CP7 247 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 RHNO1Q9BSD3 238 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 TBL1XR1Q9BZK7 514 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 Q9N2J8 555 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 LPAR3Q9UBY5 353 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 VDAC3Q9Y277 283 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 ACTL7BQ9Y614 415 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 TENM1Q9UKZ4 2725 aa11.34□□□□□ -0.59
RNF40-208ENST00000565995 IGHV4-30-2A0A087WSY4 118 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 GNG14A0A1W2PPG7 69 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 H3BQF6 201 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 CLOCKO15516 846 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 OR4F21O95013 312 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 UTS2O95399 124 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 KRT6AP02538 564 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 KRT6BP04259 564 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 CREB1P16220 341 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 DDCP20711 480 aa11.33□□□□□ -0.6
RNF40-208ENST00000565995 TIA1P31483 386 aaKnown RBP eCLIP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms