RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 ZNF583Q96ND8 569 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 COL21A1Q96P44 957 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 SIGLEC12Q96PQ1 595 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 TRNT1Q96Q11 434 aaKnown RBP11.59□□□□□ -0.55
SF3B3-206ENST00000565990 SLC29A1Q99808 456 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 CIB1Q99828 191 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 SLC39A3Q9BRY0 314 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 G6PC3Q9BUM1 346 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 THUMPD3Q9BV44 507 aaKnown RBP11.59□□□□□ -0.55
SF3B3-206ENST00000565990 TMEM38AQ9H6F2 299 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 A4GALTQ9NPC4 353 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 EXD2Q9NVH0 621 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 FBXO34Q9NWN3 711 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 SMPD3Q9NY59 655 aaPredicted RBP11.59□□□□□ -0.55
SF3B3-206ENST00000565990 LRFN1Q9P244 771 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 CHCHD2Q9Y6H1 151 aaPredicted RBP11.59□□□□□ -0.55
SF3B3-206ENST00000565990 PCNX3Q9H6A9 2034 aa11.59□□□□□ -0.55
SF3B3-206ENST00000565990 NPIPB9F8W1W9 429 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 FCMRO60667 390 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 UGT2B11O75310 529 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 GMNNO75496 209 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 REM1O75628 298 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 NGFRP08138 427 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 CD97P48960 835 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 TMED10P49755 219 aaKnown RBP11.58□□□□□ -0.56
SF3B3-206ENST00000565990 RPS6KA3P51812 740 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 FBXW4P57775 412 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 MTPNP58546 118 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 DSTNP60981 165 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 LIPEQ05469 1076 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 PLCXD2Q0VAA5 305 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 FUT5Q11128 374 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 EFR3AQ14156 821 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 OR1C1Q15619 314 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 SYPL1Q16563 259 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 NRF1Q16656 503 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 DCST2Q5T1A1 773 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 SLC22A10Q63ZE4 541 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 ANGPTL8Q6UXH0 198 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 CYP2R1Q6VVX0 501 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 RTL4Q6ZR62 310 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 ASB18Q6ZVZ8 466 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 USP51Q70EK9 711 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 MDGA2Q7Z553 956 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 GPR141Q7Z602 305 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 PRR22Q8IZ63 422 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 COX18Q8N8Q8 333 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 SPPL2AQ8TCT8 520 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 SLC38A5Q8WUX1 472 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 OTUB1Q96FW1 271 aaPredicted RBP11.58□□□□□ -0.56
SF3B3-206ENST00000565990 NSMCE2Q96MF7 247 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 ADOQ96SZ5 270 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 DOK1Q99704 481 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 SPATA9Q9BWV2 254 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 UGT2B28Q9BY64 529 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 HOXD1Q9GZZ0 328 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 GORASP2Q9H8Y8 452 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 PROK2Q9HC23 129 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 BCL2L10Q9HD36 194 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 POLE3Q9NRF9 147 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 HPF1Q9NWY4 346 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 ANKRD10Q9NXR5 420 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 CNIH4Q9P003 139 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.58□□□□□ -0.56
SF3B3-206ENST00000565990 TP53TG5Q9Y2B4 290 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 EPG5Q9HCE0 2579 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 CACNA1BQ00975 2339 aa11.58□□□□□ -0.56
SF3B3-206ENST00000565990 BOD1L1Q8NFC6 3051 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 CCDC160A6NGH7 325 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 TRIM64BA6NI03 449 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 SOCS2O14508 198 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 ADAM10O14672 748 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 TP53I11O14683 189 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 FADS1O60427 444 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 DPM1O60762 260 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 STX11O75558 287 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 ZIC2O95409 532 aaPredicted RBP11.57□□□□□ -0.56
SF3B3-206ENST00000565990 SP1P08047 785 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 NUDT7P0C024 238 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 RAP2AP10114 183 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 ATP6V1B1P15313 513 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 JUNBP17275 347 aaPredicted RBP11.57□□□□□ -0.56
SF3B3-206ENST00000565990 CNR1P21554 472 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 TBXA2RP21731 343 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 CASRP41180 1078 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 ST13P50502 369 aaKnown RBP11.57□□□□□ -0.56
SF3B3-206ENST00000565990 ARG2P78540 354 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 SNTA1Q13424 505 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 DCTN2Q13561 401 aaKnown RBP11.57□□□□□ -0.56
SF3B3-206ENST00000565990 CYP51A1Q16850 503 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 PLEKHN1Q494U1 663 aaPredicted RBP11.57□□□□□ -0.56
SF3B3-206ENST00000565990 LRRC23Q53EV4 343 aaPredicted RBP11.57□□□□□ -0.56
SF3B3-206ENST00000565990 RABL3Q5HYI8 236 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 CCNJQ5T5M9 372 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 ATAD3BQ5T9A4 648 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 PRAMEF8Q5VWM4 474 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 PRAMEF7Q5VXH5 474 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 DESI1Q6ICB0 168 aa11.57□□□□□ -0.56
SF3B3-206ENST00000565990 TYW3Q6IPR3 259 aaKnown RBP11.57□□□□□ -0.56
SF3B3-206ENST00000565990 SLC25A25Q6KCM7 469 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms