RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 RPS19BP1Q86WX3 136 aaKnown RBP17.21■□□□□ 0.35
COMMD4-213ENST00000565834 CBR4Q8N4T8 237 aa17.21■□□□□ 0.35
COMMD4-213ENST00000565834 GATSQ8NAP1 163 aa17.21■□□□□ 0.35
COMMD4-213ENST00000565834 OR5M3Q8NGP4 307 aa17.21■□□□□ 0.35
COMMD4-213ENST00000565834 NR4A3Q92570 626 aa17.21■□□□□ 0.35
COMMD4-213ENST00000565834 SLC35B4Q969S0 331 aa17.21■□□□□ 0.35
COMMD4-213ENST00000565834 MCHR1Q99705 422 aa17.21■□□□□ 0.35
COMMD4-213ENST00000565834 TBL1XR1Q9BZK7 514 aa17.21■□□□□ 0.35
COMMD4-213ENST00000565834 CDCP1Q9H5V8 836 aa17.21■□□□□ 0.35
COMMD4-213ENST00000565834 RHCGQ9UBD6 479 aa17.21■□□□□ 0.35
COMMD4-213ENST00000565834 A4GNTQ9UNA3 340 aa17.21■□□□□ 0.35
COMMD4-213ENST00000565834 LYVE1Q9Y5Y7 322 aa17.21■□□□□ 0.35
COMMD4-213ENST00000565834 A0A1W2PQD3 144 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 TNFRSF11BO00300 401 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 SOCS2O14508 198 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 TPST2O60704 377 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 GADD45GO95257 159 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 UBTFL6P0CB48 400 aaPredicted RBP17.2■□□□□ 0.34
COMMD4-213ENST00000565834 SPINK2P20155 84 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 EVI2BP34910 448 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 ZNF136P52737 540 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 MLF1P58340 268 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 PIN1Q13526 163 aaPredicted RBP17.2■□□□□ 0.34
COMMD4-213ENST00000565834 DCAF10Q5QP82 559 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 FNDC7Q5VTL7 733 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 IZUMO2Q6UXV1 221 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 APOOLQ6UXV4 268 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 PLEKHM3Q6ZWE6 761 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 NUP54Q7Z3B4 507 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 STK32CQ86UX6 486 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 HIPK1Q86Z02 1210 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 ARMC10Q8N2F6 343 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 POGLUT1Q8NBL1 392 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 PHOSPHO1Q8TCT1 267 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 PHF10Q8WUB8 498 aaKnown RBP17.2■□□□□ 0.34
COMMD4-213ENST00000565834 TMCO6Q96DC7 493 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 SPACA9Q96E40 222 aaPredicted RBP17.2■□□□□ 0.34
COMMD4-213ENST00000565834 FER1L6-AS2Q96M78 137 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 FNDC11Q9BVV2 318 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 SCNM1Q9BWG6 230 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 NMNAT1Q9HAN9 279 aaPredicted RBP17.2■□□□□ 0.34
COMMD4-213ENST00000565834 C8orf4Q9NR00 106 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 ACER3Q9NUN7 267 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 TESQ9UGI8 421 aaKnown RBP17.2■□□□□ 0.34
COMMD4-213ENST00000565834 HEATR5AQ86XA9 2040 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 SPTBN4Q9H254 2564 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 CPSF4LA6NMK7 179 aaKnown RBP17.2■□□□□ 0.34
COMMD4-213ENST00000565834 ALG1L2C9J202 215 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 H1F0P07305 194 aaKnown RBP17.2■□□□□ 0.34
COMMD4-213ENST00000565834 UBL4AP11441 157 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 PRG2P13727 222 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 ZNF26P17031 533 aaPredicted RBP17.2■□□□□ 0.34
COMMD4-213ENST00000565834 IFNA8P32881 189 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 SOX3P41225 446 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 SSR4P51571 173 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 SMIM11AP58511 58 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 TAS2R41P59536 307 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 CLN3Q13286 438 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 CD226Q15762 336 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 COLEC12Q5KU26 742 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 ENTPD8Q5MY95 495 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 OTUD3Q5T2D3 398 aaPredicted RBP17.2■□□□□ 0.34
COMMD4-213ENST00000565834 PPP4R4Q6NUP7 873 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 JMJD6Q6NYC1 403 aaPredicted RBP17.2■□□□□ 0.34
COMMD4-213ENST00000565834 OPN5Q6U736 354 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 ZNF550Q7Z398 422 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 HS3ST5Q8IZT8 346 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 GALNT4Q8N4A0 578 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 PACRGLQ8N7B6 248 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 OR52J3Q8NH60 311 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 ASB15Q8WXK1 588 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 TTC9Q92623 222 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 HGDQ93099 445 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 NRBF2Q96F24 287 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 SLC29A1Q99808 456 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 PRR14Q9BWN1 585 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 CTPS2Q9NRF8 586 aa17.2■□□□□ 0.34
COMMD4-213ENST00000565834 RYDENQ9NUL5 291 aaKnown RBP17.2■□□□□ 0.34
COMMD4-213ENST00000565834 CNOT11Q9UKZ1 510 aaKnown RBP17.2■□□□□ 0.34
COMMD4-213ENST00000565834 MAGED1Q9Y5V3 778 aaPredicted RBP17.2■□□□□ 0.34
COMMD4-213ENST00000565834 AKAP13Q12802 2813 aa17.19■□□□□ 0.34
COMMD4-213ENST00000565834 GTPBP1O00178 669 aaKnown RBP17.19■□□□□ 0.34
COMMD4-213ENST00000565834 EI24O14681 340 aa17.19■□□□□ 0.34
COMMD4-213ENST00000565834 FADS1O60427 444 aa17.19■□□□□ 0.34
COMMD4-213ENST00000565834 MAN1A2O60476 641 aa17.19■□□□□ 0.34
COMMD4-213ENST00000565834 FMO6PO60774 539 aa17.19■□□□□ 0.34
COMMD4-213ENST00000565834 CYP7B1O75881 506 aa17.19■□□□□ 0.34
COMMD4-213ENST00000565834 RASAL1O95294 804 aa17.19■□□□□ 0.34
COMMD4-213ENST00000565834 ENDOUP21128 410 aaKnown RBP17.19■□□□□ 0.34
COMMD4-213ENST00000565834 CLK3P49761 638 aaKnown RBP17.19■□□□□ 0.34
COMMD4-213ENST00000565834 GK3PQ14409 553 aa17.19■□□□□ 0.34
COMMD4-213ENST00000565834 NTRK2Q16620 822 aa17.19■□□□□ 0.34
COMMD4-213ENST00000565834 NDUFAF6Q330K2 333 aa17.19■□□□□ 0.34
COMMD4-213ENST00000565834 H3F3CQ6NXT2 135 aa17.19■□□□□ 0.34
COMMD4-213ENST00000565834 MARCH3Q86UD3 253 aa17.19■□□□□ 0.34
COMMD4-213ENST00000565834 TSPYL5Q86VY4 417 aaPredicted RBP17.19■□□□□ 0.34
COMMD4-213ENST00000565834 ZNF440Q8IYI8 595 aa17.19■□□□□ 0.34
COMMD4-213ENST00000565834 OFCC1Q8IZS5 231 aa17.19■□□□□ 0.34
COMMD4-213ENST00000565834 PIK3C3Q8NEB9 887 aa17.19■□□□□ 0.34
COMMD4-213ENST00000565834 FAM71CQ8NEG0 241 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms