RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 UMPSP11172 480 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 UBL4AP11441 157 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 SFTPCP11686 197 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 UQCRBP14927 111 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 HOXB6P17509 224 aaKnown RBP7.13□□□□□ -1.27
CDH1-208ENST00000565810 CNR1P21554 472 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 RPS4Y1P22090 263 aaKnown RBP7.13□□□□□ -1.27
CDH1-208ENST00000565810 MSX1P28360 303 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 KCNJ5P48544 419 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 TNFSF10P50591 281 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 DMTNQ08495 405 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 FGFBP1Q14512 234 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 DUSP7Q16829 419 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 ST3GAL2Q16842 350 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 FAM98BQ52LJ0 330 aaKnown RBP7.13□□□□□ -1.27
CDH1-208ENST00000565810 IFI44LQ53G44 452 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 ZNF766Q5HY98 468 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 MRPL2Q5T653 305 aaKnown RBP7.13□□□□□ -1.27
CDH1-208ENST00000565810 PRAMEF20Q5VT98 475 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 RNF220Q5VTB9 566 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 DHRS4L2Q6PKH6 230 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 C19orf48Q6RUI8 117 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 IGFL3Q6UXB1 125 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 ZNF550Q7Z398 422 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 MDGA2Q7Z553 956 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 HMGN2P46Q86SG4 172 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 MARCH3Q86UD3 253 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 ZNF440Q8IYI8 595 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 TMCO5AQ8N6Q1 288 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 GATSQ8NAP1 163 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 OR4K17Q8NGC6 315 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 C9orf43Q8TAL5 461 aaPredicted RBP7.13□□□□□ -1.27
CDH1-208ENST00000565810 DUSP19Q8WTR2 217 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 PYURFQ96I23 114 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 RSRC1Q96IZ7 334 aaKnown RBP7.13□□□□□ -1.27
CDH1-208ENST00000565810 JSRP1Q96MG2 331 aaPredicted RBP7.13□□□□□ -1.27
CDH1-208ENST00000565810 CNTNAP3BQ96NU0 1288 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 SIGLEC12Q96PQ1 595 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 FAM173AQ9BQD7 235 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 ANGPTL4Q9BY76 406 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 CNTNAP3Q9BZ76 1288 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 SH2D2AQ9NP31 389 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 KLHL1Q9NR64 748 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 OLAHQ9NV23 265 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 CNOT11Q9UKZ1 510 aaKnown RBP7.13□□□□□ -1.27
CDH1-208ENST00000565810 BOKQ9UMX3 212 aaPredicted RBP7.13□□□□□ -1.27
CDH1-208ENST00000565810 SLC9A8Q9Y2E8 581 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 PCDHGB6Q9Y5F9 930 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 WIF1Q9Y5W5 379 aa7.13□□□□□ -1.27
CDH1-208ENST00000565810 LOC400499M0QZD8 3231 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 NUP214P35658 2090 aaPredicted RBP7.12□□□□□ -1.27
CDH1-208ENST00000565810 CENPVL1A0A0U1RR11 272 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 CDHR4A6H8M9 788 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 ANKRD65E5RJM6 399 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 AP3D1O14617 1153 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 GNB5O14775 395 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 PEX1O43933 1283 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 GCM2O75603 506 aaPredicted RBP7.12□□□□□ -1.27
CDH1-208ENST00000565810 PRKD3O94806 890 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 NUDT14O95848 222 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 LGI1O95970 557 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 GPIP06744 558 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 UBTFL6P0CB48 400 aaPredicted RBP7.12□□□□□ -1.27
CDH1-208ENST00000565810 CD247P20963 164 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 ATP6V1B2P21281 511 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 PSMA4P25789 261 aaKnown RBP7.12□□□□□ -1.27
CDH1-208ENST00000565810 ELAVL4P26378 380 aaKnown RBP7.12□□□□□ -1.27
CDH1-208ENST00000565810 IFNA8P32881 189 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 SLC6A8P48029 635 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 RNF144AP50876 292 aaPredicted RBP7.12□□□□□ -1.27
CDH1-208ENST00000565810 CCR4P51679 360 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 RGS8P57771 180 aaPredicted RBP7.12□□□□□ -1.27
CDH1-208ENST00000565810 COPZ1P61923 177 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 EEF1A1P68104 462 aaKnown RBP7.12□□□□□ -1.27
CDH1-208ENST00000565810 PLGLB1Q02325 96 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 KCNC4Q03721 635 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 CHRNB3Q05901 458 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 CBFBQ13951 182 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 COL28A1Q2UY09 1125 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 BICRALQ6AI39 1079 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 APOOLQ6UXV4 268 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 ZNF836Q6ZNA1 936 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 ASB18Q6ZVZ8 466 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 GALNTL5Q7Z4T8 443 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 ZNF227Q86WZ6 799 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 CARM1Q86X55 608 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 PLCZ1Q86YW0 608 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 GRAMD2AQ8IUY3 354 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 CLIP4Q8N3C7 705 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 MDS2Q8NDY4 140 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 CATSPER1Q8NEC5 780 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 TOR1AIP2Q8NFQ8 470 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 OR1J4Q8NGS1 313 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 B4GALNT2Q8NHY0 566 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 RNF138Q8WVD3 245 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 GEMIN6Q8WXD5 167 aaKnown RBP7.12□□□□□ -1.27
CDH1-208ENST00000565810 SLC35B4Q969S0 331 aa7.12□□□□□ -1.27
CDH1-208ENST00000565810 UTP4Q969X6 686 aaKnown RBP7.12□□□□□ -1.27
CDH1-208ENST00000565810 SH3YL1Q96HL8 342 aaPredicted RBP7.12□□□□□ -1.27
CDH1-208ENST00000565810 TMEM41AQ96HV5 264 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms