RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 SDHAF3Q9NRP4 125 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 OXSMQ9NWU1 459 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 LYARQ9NX58 379 aaKnown RBP8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 EHD3Q9NZN3 535 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 TSC22D4Q9Y3Q8 395 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 FKBP7Q9Y680 259 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 PRR14LQ5THK1 2151 aa8.02□□□□□ -1.13
VPS9D1-205ENST00000565452 A0A1W2PR48 441 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 OR2M5A3KFT3 312 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 A8MT66 165 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 HMGB1P1B2RPK0 211 aaPredicted RBP8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 DYNC1I1O14576 645 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 EIF1AYO14602 144 aaKnown RBP8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 TO15178 435 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 SMAD9O15198 467 aaKnown RBP8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 BIRC5O15392 142 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 TRIM13O60858 407 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 PRKRAO75569 313 aaKnown RBP8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 OTCP00480 354 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 ADAP00813 363 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 CT62P0C5K7 136 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 PABPC4LP0CB38 370 aaKnown RBP8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 NR2F6P10588 404 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 PCNAP12004 261 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 CD22P20273 847 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 S1PR1P21453 382 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 SERPINB5P36952 375 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 ARFIP1P53367 373 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 HNRNPH2P55795 449 aaKnown RBP8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 MRPS22P82650 360 aaKnown RBP8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 IRF8Q02556 426 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 GALNT1Q10472 559 aaPredicted RBP8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 GTF2H2Q13888 395 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 PPA1Q15181 289 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 C18orf21Q32NC0 220 aaPredicted RBP8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 TMEM201Q5SNT2 666 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 LIPMQ5VYY2 423 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 ZNF544Q6NX49 715 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 GTF2H2CQ6P1K8 395 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 CYP20A1Q6UW02 462 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 USP43Q70EL4 1123 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 BHLHA15Q7RTS1 189 aaPredicted RBP8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 P2RY8Q86VZ1 359 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 TEX9Q8N6V9 391 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 PTGR2Q8N8N7 351 aaPredicted RBP8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 CCDC63Q8NA47 563 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 OR5M1Q8NGP8 315 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 TCP10LQ8TDR4 215 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 HPS1Q92902 700 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 EXT2Q93063 718 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 TMBIM1Q969X1 311 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 ATP6V1E2Q96A05 226 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 TLCD1Q96CP7 247 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 ADOQ96SZ5 270 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 TMEM79Q9BSE2 394 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 TRMOQ9BU70 441 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 SORBS1Q9BX66 1292 aaKnown RBP8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 OR51B5Q9H339 312 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 IPPKQ9H8X2 491 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 MYOZ1Q9NP98 299 aaPredicted RBP8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 PPP4R1LQ9P1A2 415 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 PRODH2Q9UF12 536 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 EMCNQ9ULC0 261 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 WBP11Q9Y2W2 641 aaKnown RBP8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 ASB4Q9Y574 426 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 PCDHGA11Q9Y5H2 935 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 CADP27708 2225 aa8.01□□□□□ -1.13
VPS9D1-205ENST00000565452 G3V2L1 256 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 PGRMC2O15173 223 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 SPAG7O75391 227 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 LY6HO94772 140 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 SUPT7LO94864 414 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 CLDN9O95484 217 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 RPS17P08708 135 aaKnown RBP8□□□□□ -1.13
VPS9D1-205ENST00000565452 FAM58BPP0C7Q3 252 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 PORP16435 677 aaPredicted RBP8□□□□□ -1.13
VPS9D1-205ENST00000565452 PTAFRP25105 342 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 PTX3P26022 381 aaPredicted RBP8□□□□□ -1.13
VPS9D1-205ENST00000565452 CCNG1P51959 295 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 CLCQ05315 142 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 MAP4K2Q12851 820 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 FOXL1Q12952 345 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 CHIT1Q13231 466 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 STK11Q15831 433 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 CFAP157Q5JU67 520 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 ZNF678Q5SXM1 525 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 OR52E8Q6IFG1 317 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 MED27Q6P2C8 311 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 TMEM108Q6UXF1 575 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 WDR75Q8IWA0 830 aaKnown RBP8□□□□□ -1.13
VPS9D1-205ENST00000565452 KIRREL3Q8IZU9 778 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 FADS6Q8N9I5 356 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 L3MBTL4Q8NA19 623 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 OR2M3Q8NG83 312 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 ZNF483Q8TF39 744 aaPredicted RBP8□□□□□ -1.13
VPS9D1-205ENST00000565452 MRPL24Q96A35 216 aaKnown RBP8□□□□□ -1.13
VPS9D1-205ENST00000565452 SLC35A4Q96G79 324 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 REXO5Q96IC2 774 aaKnown RBP8□□□□□ -1.13
VPS9D1-205ENST00000565452 ATP6V1G3Q96LB4 118 aa8□□□□□ -1.13
VPS9D1-205ENST00000565452 ITPAQ9BY32 194 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms