RNA–Protein interactions for RNA: ENST00000565354.5

CLN3-217, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 759 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-217ENST00000565354 GCKP35557 465 aa15.7■□□□□ 0.1
CLN3-217ENST00000565354 SMSP52788 366 aa15.7■□□□□ 0.1
CLN3-217ENST00000565354 ATP12AP54707 1039 aa15.7■□□□□ 0.1
CLN3-217ENST00000565354 HSF1Q00613 529 aa15.7■□□□□ 0.1
CLN3-217ENST00000565354 C17orf67Q0P5P2 114 aa15.7■□□□□ 0.1
CLN3-217ENST00000565354 FADDQ13158 208 aa15.7■□□□□ 0.1
CLN3-217ENST00000565354 CYLC2Q14093 348 aaPredicted RBP15.7■□□□□ 0.1
CLN3-217ENST00000565354 HEPHL1Q6MZM0 1159 aa15.7■□□□□ 0.1
CLN3-217ENST00000565354 MTDHQ86UE4 582 aaKnown RBP15.7■□□□□ 0.1
CLN3-217ENST00000565354 SNX32Q86XE0 403 aa15.7■□□□□ 0.1
CLN3-217ENST00000565354 MISPQ8IVT2 679 aa15.7■□□□□ 0.1
CLN3-217ENST00000565354 DUSP19Q8WTR2 217 aa15.7■□□□□ 0.1
CLN3-217ENST00000565354 RNF138Q8WVD3 245 aa15.7■□□□□ 0.1
CLN3-217ENST00000565354 PTGES2Q9H7Z7 377 aa15.7■□□□□ 0.1
CLN3-217ENST00000565354 ZDHHC11Q9H8X9 412 aa15.7■□□□□ 0.1
CLN3-217ENST00000565354 POLE3Q9NRF9 147 aa15.7■□□□□ 0.1
CLN3-217ENST00000565354 THUMPD1Q9NXG2 353 aaKnown RBP15.7■□□□□ 0.1
CLN3-217ENST00000565354 FAM53CQ9NYF3 392 aa15.7■□□□□ 0.1
CLN3-217ENST00000565354 VAPAQ9P0L0 249 aa15.7■□□□□ 0.1
CLN3-217ENST00000565354 SLAMF8Q9P0V8 285 aa15.7■□□□□ 0.1
CLN3-217ENST00000565354 MKLN1Q9UL63 735 aa15.7■□□□□ 0.1
CLN3-217ENST00000565354 NINQ8N4C6 2090 aa15.69■□□□□ 0.1
CLN3-217ENST00000565354 TRGV5A0A0B4J1U4 118 aa15.69■□□□□ 0.1
CLN3-217ENST00000565354 A0A1B0GTH9 108 aa15.69■□□□□ 0.1
CLN3-217ENST00000565354 ALG1L2C9J202 215 aa15.69■□□□□ 0.1
CLN3-217ENST00000565354 MRASO14807 208 aa15.69■□□□□ 0.1
CLN3-217ENST00000565354 ESRRAP11474 423 aaPredicted RBP15.69■□□□□ 0.1
CLN3-217ENST00000565354 GAS1P54826 345 aa15.69■□□□□ 0.1
CLN3-217ENST00000565354 GNA13Q14344 377 aa15.69■□□□□ 0.1
CLN3-217ENST00000565354 RGNQ15493 299 aa15.69■□□□□ 0.1
CLN3-217ENST00000565354 CDSNQ15517 529 aa15.69■□□□□ 0.1
CLN3-217ENST00000565354 SYPL1Q16563 259 aa15.69■□□□□ 0.1
CLN3-217ENST00000565354 FNDC7Q5VTL7 733 aa15.69■□□□□ 0.1
CLN3-217ENST00000565354 ARHGAP11AQ6P4F7 1023 aa15.69■□□□□ 0.1
CLN3-217ENST00000565354 DPP10Q8N608 796 aa15.69■□□□□ 0.1
CLN3-217ENST00000565354 WDSUB1Q8N9V3 476 aa15.69■□□□□ 0.1
CLN3-217ENST00000565354 PCYOX1LQ8NBM8 494 aa15.69■□□□□ 0.1
CLN3-217ENST00000565354 OR14L1PQ8NHC6 308 aa15.69■□□□□ 0.1
CLN3-217ENST00000565354 PHOSPHO1Q8TCT1 267 aa15.69■□□□□ 0.1
CLN3-217ENST00000565354 ZNF350Q9GZX5 532 aa15.69■□□□□ 0.1
CLN3-217ENST00000565354 DSN1Q9H410 356 aa15.69■□□□□ 0.1
CLN3-217ENST00000565354 CACYBPQ9HB71 228 aaKnown RBP15.69■□□□□ 0.1
CLN3-217ENST00000565354 SLC25A37Q9NYZ2 338 aa15.69■□□□□ 0.1
CLN3-217ENST00000565354 CALML5Q9NZT1 146 aa15.69■□□□□ 0.1
CLN3-217ENST00000565354 ARL2BPQ9Y2Y0 163 aa15.69■□□□□ 0.1
CLN3-217ENST00000565354 A0A1W2PQD3 144 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 C5orf58C9J3I9 102 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 FAM47E-STBD1D6RA91 191 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 GTPBP1O00178 669 aaKnown RBP15.68■□□□□ 0.1
CLN3-217ENST00000565354 GMFGO60234 142 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 FCMRO60667 390 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 WISP2O76076 250 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 H6PDO95479 791 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 CLDN14O95500 239 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 BCHEP06276 602 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 CELA3AP09093 270 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 PTGS2P35354 604 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 C3AR1Q16581 482 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 REP15Q6BDI9 236 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 APOOLQ6UXV4 268 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 OLIG3Q7RTU3 272 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 RETREG3Q86VR2 466 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 ZNF619Q8N2I2 560 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 ANKFN1Q8N957 763 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 TRNT1Q96Q11 434 aaKnown RBP15.68■□□□□ 0.1
CLN3-217ENST00000565354 CGREF1Q99674 301 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 SPOCK3Q9BQ16 436 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 THUMPD3Q9BV44 507 aaKnown RBP15.68■□□□□ 0.1
CLN3-217ENST00000565354 SLC6A15Q9H2J7 730 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 MED11Q9P086 117 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 FBXL2Q9UKC9 423 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 ADAM21Q9UKJ8 722 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 DTNAQ9Y4J8 743 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 LIPGQ9Y5X9 500 aa15.68■□□□□ 0.1
CLN3-217ENST00000565354 ABCA2Q9BZC7 2435 aa15.67■□□□□ 0.1
CLN3-217ENST00000565354 C15orf38-AP3S2A0A0A6YYH1 394 aa15.67■□□□□ 0.1
CLN3-217ENST00000565354 PRRG2O14669 202 aa15.67■□□□□ 0.1
CLN3-217ENST00000565354 KIAA0513O60268 411 aa15.67■□□□□ 0.1
CLN3-217ENST00000565354 HCN1O60741 890 aa15.67■□□□□ 0.1
CLN3-217ENST00000565354 IGHG3P01860 377 aa15.67■□□□□ 0.1
CLN3-217ENST00000565354 HPNP05981 417 aa15.67■□□□□ 0.1
CLN3-217ENST00000565354 TPOP07202 933 aa15.67■□□□□ 0.1
CLN3-217ENST00000565354 HOXB9P17482 250 aaPredicted RBP15.67■□□□□ 0.1
CLN3-217ENST00000565354 ENDOUP21128 410 aaKnown RBP15.67■□□□□ 0.1
CLN3-217ENST00000565354 TCEA1P23193 301 aaKnown RBP15.67■□□□□ 0.1
CLN3-217ENST00000565354 DPP4P27487 766 aa15.67■□□□□ 0.1
CLN3-217ENST00000565354 RNF144AP50876 292 aaPredicted RBP15.67■□□□□ 0.1
CLN3-217ENST00000565354 MVDP53602 400 aa15.67■□□□□ 0.1
CLN3-217ENST00000565354 CRISP3P54108 245 aa15.67■□□□□ 0.1
CLN3-217ENST00000565354 DSCR4P56555 118 aaPredicted RBP15.67■□□□□ 0.1
CLN3-217ENST00000565354 TLE4Q04727 773 aa15.67■□□□□ 0.1
CLN3-217ENST00000565354 FUT5Q11128 374 aa15.67■□□□□ 0.1
CLN3-217ENST00000565354 TRMT5Q32P41 509 aaKnown RBP15.67■□□□□ 0.1
CLN3-217ENST00000565354 RUNDC3AQ59EK9 446 aa15.67■□□□□ 0.1
CLN3-217ENST00000565354 COQ5Q5HYK3 327 aa15.67■□□□□ 0.1
CLN3-217ENST00000565354 PDZK1Q5T2W1 519 aa15.67■□□□□ 0.1
CLN3-217ENST00000565354 GCNT6Q5T4J0 391 aa15.67■□□□□ 0.1
CLN3-217ENST00000565354 TYW3Q6IPR3 259 aaKnown RBP15.67■□□□□ 0.1
CLN3-217ENST00000565354 DLEU7Q6UYE1 221 aa15.67■□□□□ 0.1
CLN3-217ENST00000565354 LRRC74BQ6ZQY2 392 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms