RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 PTHP01270 115 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 ADH5P11766 374 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 CTSL3PQ5NE16 218 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 OR52E8Q6IFG1 317 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 TMPRSS9Q7Z410 1059 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 TCTE3Q8IZS6 198 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 L3HYPDHQ96EM0 354 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 RDH14Q9HBH5 336 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 TNS2Q63HR2 1409 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 MYO5AQ9Y4I1 1855 aaKnown RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 C1GALT1C1LP0DN25 315 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 RAB7AP51149 207 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 GDF10P55107 478 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 DLX2Q07687 328 aaPredicted RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 MEX3BQ6ZN04 569 aaKnown RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 SLC51BQ86UW2 128 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 CCDC116Q8IYX3 515 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 WDR20Q8TBZ3 569 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 FRS2Q8WU20 508 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 TMEM18Q96B42 140 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 PBX4Q9BYU1 374 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 SOX17Q9H6I2 414 aaPredicted RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 FCF1Q9Y324 198 aaKnown RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 IFT172Q9UG01 1749 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 CEBPZOSA8MTT3 80 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 H3BSH0 61 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 UGDHO60701 494 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 ZNF623O75123 536 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 FXYD4P59646 89 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 SP3Q02447 781 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 MLLT11Q13015 90 aaPredicted RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 SLC14A1Q13336 389 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 SLC17A1Q14916 467 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 YIF1BQ5BJH7 314 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 SFRP5Q5T4F7 317 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 OR4C5Q8NGB2 326 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 OR52N2Q8NGI0 321 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 OR4D6Q8NGJ1 314 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 FAM213BQ8TBF2 198 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 AMDHD1Q96NU7 426 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 DEFB126Q9BYW3 111 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 AGPAT4Q9NRZ5 378 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 GJD2Q9UKL4 321 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 ACAD8Q9UKU7 415 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 YTHDF2Q9Y5A9 579 aaKnown RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 WASH4PA8MWX3 477 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 POP7O75817 140 aaKnown RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 GLSO94925 669 aaPredicted RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 GALTP07902 379 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 CSKP41240 450 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 CXADRP78310 365 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 TGFBR3Q03167 851 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 OR4K5Q8NGD3 323 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 C11orf84Q9BUA3 381 aaPredicted RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 NUDT9Q9BW91 350 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 QRSL1Q9H0R6 528 aaKnown RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 SALL4Q9UJQ4 1053 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 PCDHGA6Q9Y5G7 932 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 SCN9AQ15858 1988 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 SPATA31A5Q5VU36 1347 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 SPATA31A7Q8IWB4 1347 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 CALCRP30988 508 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 P2RX1P51575 399 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 FAM74A1Q5RGS3 127 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 COL13A1Q5TAT6 717 aaPredicted RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 ZNF691Q5VV52 312 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 CNKSR3Q6P9H4 555 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 TAC4Q86UU9 113 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 SLC43A2Q8N370 569 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 PARP16Q8N5Y8 322 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 OR4E2Q8NGC2 313 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 OR52H1Q8NGJ2 320 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 OR10Q1Q8NGQ4 319 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 ZNF251Q9BRH9 671 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 KATNB1Q9BVA0 655 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 SIAEQ9HAT2 523 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 ZNF331Q9NQX6 463 aaPredicted RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 RASD1Q9Y272 281 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 TMEM82A0PJX8 343 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 SPI1P17947 270 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 FBLP22087 321 aaKnown RBP4.81□□□□□ -1.64
SMG1-211ENST00000565324 POU3F4P49335 361 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 VEZF1Q14119 521 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 DUSP6Q16828 381 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 DCAF12L1Q5VU92 463 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 OR10K1Q8NGX5 313 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 MARC2Q969Z3 335 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 MS4A4EQ96PG1 132 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 SEMA4CQ9C0C4 833 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 NSUN3Q9H649 340 aaKnown RBP4.81□□□□□ -1.64
SMG1-211ENST00000565324 NOX3Q9HBY0 568 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 TLR9Q9NR96 1032 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 THSD1Q9NS62 852 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 MED17Q9NVC6 651 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 ZMAT5Q9UDW3 170 aaKnown RBP4.81□□□□□ -1.64
SMG1-211ENST00000565324 PCDHB10Q9UN67 800 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 PHRF1Q9P1Y6 1649 aaKnown RBP4.81□□□□□ -1.64
SMG1-211ENST00000565324 A0A1W2PPK0 400 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 SDHDO14521 159 aa4.81□□□□□ -1.64
SMG1-211ENST00000565324 CCL16O15467 120 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms