RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 RGS16O15492 202 aaPredicted RBP9.01□□□□□ -0.97
CMTM3-209ENST00000565003 CTIFO43310 598 aaKnown RBP9.01□□□□□ -0.97
CMTM3-209ENST00000565003 OIP5O43482 229 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 HSPA4LO95757 839 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 CGAP01215 116 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 OPN1LWP04000 364 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 SERPINE1P05121 402 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 DHRS4L1P0CG22 281 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 NPIPA8P0DM63 369 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 HPGDP15428 266 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 ZNF17P17021 662 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 PRPS1L1P21108 318 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 LCN1P31025 176 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 EIF1AXP47813 144 aaKnown RBP9.01□□□□□ -0.97
CMTM3-209ENST00000565003 RNF144AP50876 292 aaPredicted RBP9.01□□□□□ -0.97
CMTM3-209ENST00000565003 ZNF41P51814 821 aaPredicted RBP9.01□□□□□ -0.97
CMTM3-209ENST00000565003 C21orf58P58505 322 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 EEF1A1P68104 462 aaKnown RBP9.01□□□□□ -0.97
CMTM3-209ENST00000565003 HBA1P69905 142 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 EMX2Q04743 252 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 TP53BP2Q13625 1128 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 CHI3L2Q15782 390 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 SGCBQ16585 318 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.01□□□□□ -0.97
CMTM3-209ENST00000565003 EEF1A1P5Q5VTE0 462 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 ZNF781Q8N8C0 355 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 OR56A1Q8NGH5 318 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 PPP1R14CQ8TAE6 165 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 POC1BQ8TC44 478 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 ACTRT2Q8TDY3 377 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 ZBTB9Q96C00 473 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 CHMP6Q96FZ7 201 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 ADGRG7Q96K78 797 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 RNF145Q96MT1 663 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 DUSP26Q9BV47 211 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 ACTRT3Q9BYD9 372 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 BHLHE41Q9C0J9 482 aaPredicted RBP9.01□□□□□ -0.97
CMTM3-209ENST00000565003 TMEM185BQ9H7F4 350 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 PLEKHF2Q9H8W4 249 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 NEUROD4Q9HD90 331 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 ATAD3AQ9NVI7 634 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 ASIC5Q9NY37 505 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 TESMINQ9Y4I5 508 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 KCNE3Q9Y6H6 103 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 MTORP42345 2549 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 A0A087WZY1 265 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 CFLARO15519 480 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 SIAH2O43255 324 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 ZNF500O60304 480 aaPredicted RBP9□□□□□ -0.97
CMTM3-209ENST00000565003 GOSR1O95249 250 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 ATE1O95260 518 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 LINGO3P0C6S8 592 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 FCGR2AP12318 317 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 IL11P20809 199 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 DNASE1P24855 282 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 CD79BP40259 229 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 CLDN8P56748 225 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 ABCE1P61221 599 aaKnown RBP9□□□□□ -0.97
CMTM3-209ENST00000565003 RPS3AP61247 264 aaKnown RBP9□□□□□ -0.97
CMTM3-209ENST00000565003 RPS26P62854 115 aaKnown RBP9□□□□□ -0.97
CMTM3-209ENST00000565003 OCRLQ01968 901 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 ZNF117Q03924 483 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 FOXF1Q12946 379 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 MPP2Q14168 576 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 NDUFAF6Q330K2 333 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 LSM12Q3MHD2 195 aaKnown RBP9□□□□□ -0.97
CMTM3-209ENST00000565003 SPDYE7PQ495Y7 208 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 TNFAIP8L3Q5GJ75 292 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 DCST2Q5T1A1 773 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 PPP4R4Q6NUP7 873 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 CBLN3Q6UW01 205 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 CAMKMTQ7Z624 323 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 MISPQ8IVT2 679 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 WDR75Q8IWA0 830 aaKnown RBP9□□□□□ -0.97
CMTM3-209ENST00000565003 CLECL1Q8IZS7 167 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 CLEC4FQ8N1N0 589 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 NATD1Q8N6N6 113 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 OR5D16Q8NGK9 328 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 OR10D3Q8NH80 312 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 B4GALNT2Q8NHY0 566 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 SFXN5Q8TD22 340 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 ADAMTS15Q8TE58 950 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 ZBTB8AQ96BR9 441 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 PGM2Q96G03 612 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 WFIKKN1Q96NZ8 548 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 ALPK1Q96QP1 1244 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 SORT1Q99523 831 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 PRPF18Q99633 342 aaKnown RBP9□□□□□ -0.97
CMTM3-209ENST00000565003 SERHL2Q9H4I8 314 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 AKTIPQ9H8T0 292 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 SSU72Q9NP77 194 aaKnown RBP9□□□□□ -0.97
CMTM3-209ENST00000565003 KLHL28Q9NXS3 571 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 NOP53Q9NZM5 478 aaKnown RBP9□□□□□ -0.97
CMTM3-209ENST00000565003 RAB21Q9UL25 225 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 CLEC4AQ9UMR7 237 aa9□□□□□ -0.97
CMTM3-209ENST00000565003 FAF1Q9UNN5 650 aaPredicted RBP9□□□□□ -0.97
CMTM3-209ENST00000565003 EIF3LQ9Y262 564 aaKnown RBP9□□□□□ -0.97
CMTM3-209ENST00000565003 ITPR3Q14573 2671 aa8.99□□□□□ -0.97
CMTM3-209ENST00000565003 ZNF469Q96JG9 3925 aaPredicted RBP8.99□□□□□ -0.97
CMTM3-209ENST00000565003 A0A0J9YW62 118 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms