RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 STEAP4Q687X5 459 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 FRMPD2BQ6IN97 320 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 FAM198BQ6UWH4 519 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 GATSQ8NAP1 163 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 SPTSSAQ969W0 71 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 OR52E6Q96RD3 313 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 PANX1Q96RD7 426 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 F2RL3Q96RI0 385 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 IL21RQ9HBE5 538 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 S100A14Q9HCY8 104 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 ENY2Q9NPA8 101 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 ACTR10Q9NZ32 417 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 KLHL21Q9UJP4 597 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 CYP8B1Q9UNU6 501 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 RFXANKO14593 260 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 AZIN1O14977 448 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 SEC14L2O76054 403 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 IGLV3-27P01718 113 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 ADH5P11766 374 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 MSX1P28360 303 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 DCTP40126 519 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 COMPP49747 757 aaPredicted RBP3.15□□□□□ -1.9
CHD9-213ENST00000564845 RIDAP52758 137 aaKnown RBP3.15□□□□□ -1.9
CHD9-213ENST00000564845 ATP12AP54707 1039 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 MED22Q15528 200 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 SLC6A19Q695T7 634 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 FCRL6Q6DN72 434 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 C22orf39Q6P5X5 142 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 CYP2U1Q7Z449 544 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 ZNF547Q8IVP9 402 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 FAM109AQ8N4B1 249 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 ZBTB2Q8N680 514 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 OR4A15Q8NGL6 344 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 OR9A1PQ8NGU1 263 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 MUL1Q969V5 352 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 ZNF707Q96C28 371 aaPredicted RBP3.15□□□□□ -1.9
CHD9-213ENST00000564845 UBXN10Q96LJ8 280 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 TSSK2Q96PF2 358 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 CMSS1Q9BQ75 279 aaKnown RBP3.15□□□□□ -1.9
CHD9-213ENST00000564845 ACPTQ9BZG2 426 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 WBP1LQ9NX94 342 aa3.15□□□□□ -1.9
CHD9-213ENST00000564845 ZNF346Q9UL40 294 aaKnown RBP3.15□□□□□ -1.9
CHD9-213ENST00000564845 PTPRSQ13332 1948 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 C2orf92A0A1B0GVN3 265 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 AIFM1O95831 613 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 C6P13671 934 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 TEKQ02763 1124 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 SLC34A1Q06495 639 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 OCLNQ16625 522 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 C1orf94Q6P1W5 598 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 TRAT1Q6PIZ9 186 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 DEGS2Q6QHC5 323 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 SMIM15Q7Z3B0 74 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 SLC43A3Q8NBI5 491 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 OR6T1Q8NGN1 323 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 TCEAL3Q969E4 200 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 C12orf10Q9HB07 376 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 TEX10Q9NXF1 929 aaPredicted RBP3.15□□□□□ -1.91
CHD9-213ENST00000564845 SPHK1Q9NYA1 384 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 ZMIZ1Q9ULJ6 1067 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 AKAP13Q12802 2813 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 DHRS12A0PJE2 317 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 ANXA2P2A6NMY6 339 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 IRF2P14316 349 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 CR2P20023 1033 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 IMPDH1P20839 514 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 MAOAP21397 527 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 RPS3P23396 243 aaKnown RBP eCLIP3.15□□□□□ -1.91
CHD9-213ENST00000564845 P2RY2P41231 377 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 POLR2HP52434 150 aaKnown RBP3.15□□□□□ -1.91
CHD9-213ENST00000564845 DCDC1P59894 354 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 GPR85P60893 370 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 TAGLNQ01995 201 aaKnown RBP3.15□□□□□ -1.91
CHD9-213ENST00000564845 SCAPQ12770 1279 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 EXT1Q16394 746 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 VMACQ2NL98 169 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 ZNF829Q3KNS6 432 aaPredicted RBP3.15□□□□□ -1.91
CHD9-213ENST00000564845 LANCL3Q6ZV70 420 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 NPAS3Q8IXF0 933 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 RGMAQ96B86 450 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 TMEM168Q9H0V1 697 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 PTTG2Q9NZH5 202 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 IL17CQ9P0M4 197 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 PKIGQ9Y2B9 76 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 OR6C76A6NM76 312 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 CDH1P12830 882 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 ATP1B2P14415 290 aaPredicted RBP3.15□□□□□ -1.91
CHD9-213ENST00000564845 RABIFP47224 123 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 ECH1Q13011 328 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 BCL2A1Q16548 175 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 OR5M10Q6IEU7 315 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 ZNF600Q6ZNG1 722 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 RBM44Q6ZP01 1051 aaKnown RBP3.15□□□□□ -1.91
CHD9-213ENST00000564845 PIGXQ8TBF5 258 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 RNF32Q9H0A6 362 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 CA10Q9NS85 328 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 ENPP5Q9UJA9 477 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 PCTPQ9UKL6 214 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 ADAM18Q9Y3Q7 739 aa3.15□□□□□ -1.91
CHD9-213ENST00000564845 TDRD6O60522 2096 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms