RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 STARD5Q9NSY2 213 aa20.77■□□□□ 0.92
SPSB3-206ENST00000564709 EXOGQ9Y2C4 368 aaKnown RBP20.77■□□□□ 0.92
SPSB3-206ENST00000564709 UNC119BA6NIH7 251 aa20.77■□□□□ 0.92
SPSB3-206ENST00000564709 GABRPO00591 440 aa20.77■□□□□ 0.92
SPSB3-206ENST00000564709 FGF9P31371 208 aaPredicted RBP20.77■□□□□ 0.92
SPSB3-206ENST00000564709 RFX3P48380 749 aa20.77■□□□□ 0.92
SPSB3-206ENST00000564709 EIPR1Q53HC9 387 aa20.77■□□□□ 0.92
SPSB3-206ENST00000564709 VASNQ6EMK4 673 aa20.77■□□□□ 0.92
SPSB3-206ENST00000564709 ZNF544Q6NX49 715 aa20.77■□□□□ 0.92
SPSB3-206ENST00000564709 TMEM53Q6P2H8 277 aa20.77■□□□□ 0.92
SPSB3-206ENST00000564709 RAB43Q86YS6 212 aa20.77■□□□□ 0.92
SPSB3-206ENST00000564709 ARIH2OSQ8N7S6 290 aa20.77■□□□□ 0.92
SPSB3-206ENST00000564709 ATP6V1C2Q8NEY4 427 aa20.77■□□□□ 0.92
SPSB3-206ENST00000564709 RIPOR3Q96MK2 946 aa20.77■□□□□ 0.92
SPSB3-206ENST00000564709 C11orf54Q9H0W9 315 aaPredicted RBP20.77■□□□□ 0.92
SPSB3-206ENST00000564709 PIGUQ9H490 435 aa20.77■□□□□ 0.92
SPSB3-206ENST00000564709 NEK6Q9HC98 313 aa20.77■□□□□ 0.92
SPSB3-206ENST00000564709 TNFRSF10DQ9UBN6 386 aa20.77■□□□□ 0.92
SPSB3-206ENST00000564709 PILRAQ9UKJ1 303 aa20.77■□□□□ 0.92
SPSB3-206ENST00000564709 PCOLCE2Q9UKZ9 415 aa20.77■□□□□ 0.92
SPSB3-206ENST00000564709 C19orf53Q9UNZ5 99 aaPredicted RBP20.77■□□□□ 0.92
SPSB3-206ENST00000564709 NCKAP1Q9Y2A7 1128 aa20.77■□□□□ 0.92
SPSB3-206ENST00000564709 TRDV1A0A1B0GX56 115 aa20.76■□□□□ 0.91
SPSB3-206ENST00000564709 POLR1CO15160 346 aaPredicted RBP20.76■□□□□ 0.91
SPSB3-206ENST00000564709 AKAP8O43823 692 aaKnown RBP20.76■□□□□ 0.91
SPSB3-206ENST00000564709 HPGDSO60760 199 aa20.76■□□□□ 0.91
SPSB3-206ENST00000564709 IGHA1P01876 353 aa20.76■□□□□ 0.91
SPSB3-206ENST00000564709 IFI30P13284 250 aa20.76■□□□□ 0.91
SPSB3-206ENST00000564709 SF3B4Q15427 424 aaKnown RBP eCLIP20.76■□□□□ 0.911e-6■■□□□ 13.7
SPSB3-206ENST00000564709 OR1Q1Q15612 314 aa20.76■□□□□ 0.91
SPSB3-206ENST00000564709 ALG11Q2TAA5 492 aa20.76■□□□□ 0.91
SPSB3-206ENST00000564709 ABHD13Q7L211 337 aa20.76■□□□□ 0.91
SPSB3-206ENST00000564709 GATAD2AQ86YP4 633 aa20.76■□□□□ 0.91
SPSB3-206ENST00000564709 SAMD14Q8IZD0 417 aaPredicted RBP20.76■□□□□ 0.91
SPSB3-206ENST00000564709 AP3S1Q92572 193 aa20.76■□□□□ 0.91
SPSB3-206ENST00000564709 EFHD2Q96C19 240 aaPredicted RBP20.76■□□□□ 0.91
SPSB3-206ENST00000564709 HCAR1Q9BXC0 346 aa20.76■□□□□ 0.91
SPSB3-206ENST00000564709 MED17Q9NVC6 651 aa20.76■□□□□ 0.91
SPSB3-206ENST00000564709 CEP290O15078 2479 aa20.76■□□□□ 0.91
SPSB3-206ENST00000564709 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.76■□□□□ 0.91
SPSB3-206ENST00000564709 TRAPPC13A5PLN9 417 aa20.76■□□□□ 0.91
SPSB3-206ENST00000564709 TNFSF14O43557 240 aa20.76■□□□□ 0.91
SPSB3-206ENST00000564709 HOXD12P35452 270 aa20.76■□□□□ 0.91
SPSB3-206ENST00000564709 ATAD3CQ5T2N8 411 aa20.76■□□□□ 0.91
SPSB3-206ENST00000564709 FCRLBQ6BAA4 426 aa20.76■□□□□ 0.91
SPSB3-206ENST00000564709 FRMD1Q8N878 549 aa20.76■□□□□ 0.91
SPSB3-206ENST00000564709 CAMKVQ8NCB2 501 aa20.76■□□□□ 0.91
SPSB3-206ENST00000564709 OR6F1Q8NGZ6 308 aa20.76■□□□□ 0.91
SPSB3-206ENST00000564709 NEIL3Q8TAT5 605 aa20.76■□□□□ 0.91
SPSB3-206ENST00000564709 MRGPRX1Q96LB2 322 aa20.76■□□□□ 0.91
SPSB3-206ENST00000564709 ZFYVE21Q9BQ24 234 aa20.76■□□□□ 0.91
SPSB3-206ENST00000564709 GXYLT2A0PJZ3 443 aa20.75■□□□□ 0.91
SPSB3-206ENST00000564709 URADA6NGE7 173 aa20.75■□□□□ 0.91
SPSB3-206ENST00000564709 STX11O75558 287 aa20.75■□□□□ 0.91
SPSB3-206ENST00000564709 CSF2P04141 144 aa20.75■□□□□ 0.91
SPSB3-206ENST00000564709 CT62P0C5K7 136 aa20.75■□□□□ 0.91
SPSB3-206ENST00000564709 APEX1P27695 318 aaKnown RBP20.75■□□□□ 0.91
SPSB3-206ENST00000564709 CTHP32929 405 aa20.75■□□□□ 0.91
SPSB3-206ENST00000564709 SRP54P61011 504 aaKnown RBP20.75■□□□□ 0.91
SPSB3-206ENST00000564709 FZD5Q13467 585 aa20.75■□□□□ 0.91
SPSB3-206ENST00000564709 PPP2R2DQ66LE6 453 aa20.75■□□□□ 0.91
SPSB3-206ENST00000564709 ZNF322Q6U7Q0 402 aaPredicted RBP20.75■□□□□ 0.91
SPSB3-206ENST00000564709 ABI3BPQ7Z7G0 1075 aa20.75■□□□□ 0.91
SPSB3-206ENST00000564709 ZNF761Q86XN6 746 aaPredicted RBP20.75■□□□□ 0.91
SPSB3-206ENST00000564709 GALNT6Q8NCL4 622 aa20.75■□□□□ 0.91
SPSB3-206ENST00000564709 RERGQ96A58 199 aaPredicted RBP20.75■□□□□ 0.91
SPSB3-206ENST00000564709 CTRCQ99895 268 aa20.75■□□□□ 0.91
SPSB3-206ENST00000564709 KRCC1Q9NPI7 259 aaPredicted RBP20.75■□□□□ 0.91
SPSB3-206ENST00000564709 SIDT1Q9NXL6 827 aaKnown RBP20.75■□□□□ 0.91
SPSB3-206ENST00000564709 ZNF223Q9UK11 482 aaPredicted RBP20.75■□□□□ 0.91
SPSB3-206ENST00000564709 ZNF221Q9UK13 617 aa20.75■□□□□ 0.91
SPSB3-206ENST00000564709 NDRG2Q9UN36 371 aaKnown RBP20.75■□□□□ 0.91
SPSB3-206ENST00000564709 GRIP1Q9Y3R0 1128 aa20.75■□□□□ 0.91
SPSB3-206ENST00000564709 HMGN1P05114 100 aa20.75■□□□□ 0.91
SPSB3-206ENST00000564709 KRT8P05787 483 aa20.75■□□□□ 0.91
SPSB3-206ENST00000564709 THBS1P07996 1170 aa20.75■□□□□ 0.91
SPSB3-206ENST00000564709 HOXC4P09017 264 aaPredicted RBP20.75■□□□□ 0.91
SPSB3-206ENST00000564709 PPP1CAP62136 330 aa20.75■□□□□ 0.91
SPSB3-206ENST00000564709 TMEM44Q2T9K0 475 aa20.75■□□□□ 0.91
SPSB3-206ENST00000564709 ZC3H14Q6PJT7 736 aaKnown RBP20.75■□□□□ 0.91
SPSB3-206ENST00000564709 TMEM99Q8N816 258 aa20.75■□□□□ 0.91
SPSB3-206ENST00000564709 TMEM239Q8WW34 195 aa20.75■□□□□ 0.91
SPSB3-206ENST00000564709 CDCA3Q99618 268 aaPredicted RBP20.75■□□□□ 0.91
SPSB3-206ENST00000564709 C12orf71A8MTZ7 269 aa20.74■□□□□ 0.91
SPSB3-206ENST00000564709 HNRNPA2B1P22626 353 aaKnown RBP20.74■□□□□ 0.91
SPSB3-206ENST00000564709 ASAH1Q13510 395 aa20.74■□□□□ 0.91
SPSB3-206ENST00000564709 CNIH2Q6PI25 160 aa20.74■□□□□ 0.91
SPSB3-206ENST00000564709 ZAR1Q86SH2 424 aa20.74■□□□□ 0.91
SPSB3-206ENST00000564709 OR13C2Q8NGS9 318 aa20.74■□□□□ 0.91
SPSB3-206ENST00000564709 GRHL3Q8TE85 626 aa20.74■□□□□ 0.91
SPSB3-206ENST00000564709 ZNF486Q96H40 463 aaPredicted RBP20.74■□□□□ 0.91
SPSB3-206ENST00000564709 SLC22A4Q9H015 551 aa20.74■□□□□ 0.91
SPSB3-206ENST00000564709 CHST10O43529 356 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 APBB3O95704 486 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 DBIP07108 87 aaKnown RBP20.73■□□□□ 0.91
SPSB3-206ENST00000564709 NID1P14543 1247 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 RPS4Y1P22090 263 aaKnown RBP20.73■□□□□ 0.91
SPSB3-206ENST00000564709 P2RY14Q15391 338 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 KLHL12Q53G59 568 aa20.73■□□□□ 0.91
SPSB3-206ENST00000564709 EOGTQ5NDL2 527 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms