RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 HNRNPCL1O60812 293 aaKnown RBP14.53□□□□□ -0.08
RAB40C-208ENST00000564703 UGT2B17O75795 530 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 CYP7B1O75881 506 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 DCTN3O75935 186 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 FAM107AO95990 144 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 CSTAP01040 98 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 BCHEP06276 602 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 TFPTP0C1Z6 253 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 HNRNPCL4P0DMR1 293 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 COX4I1P13073 169 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 IL7RP16871 459 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 ZNF41P51814 821 aaPredicted RBP14.53□□□□□ -0.08
RAB40C-208ENST00000564703 PER3P56645 1201 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 SF3B4Q15427 424 aaKnown RBP eCLIP14.53□□□□□ -0.085e-9■■■■■ 30.3
RAB40C-208ENST00000564703 TRMT5Q32P41 509 aaKnown RBP14.53□□□□□ -0.08
RAB40C-208ENST00000564703 GXYLT1Q4G148 440 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 GCNT6Q5T4J0 391 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 AAGABQ6PD74 315 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 ENPP6Q6UWR7 440 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 Q6ZPB1 254 aaPredicted RBP14.53□□□□□ -0.08
RAB40C-208ENST00000564703 EIF3MQ7L2H7 374 aaKnown RBP14.53□□□□□ -0.08
RAB40C-208ENST00000564703 OLIG3Q7RTU3 272 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 IFNEQ86WN2 208 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 MSRB3Q8IXL7 192 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 FADS6Q8N9I5 356 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 SLC38A5Q8WUX1 472 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 ABTB1Q969K4 478 aaPredicted RBP14.53□□□□□ -0.08
RAB40C-208ENST00000564703 LRRC58Q96CX6 371 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 SH3YL1Q96HL8 342 aaPredicted RBP14.53□□□□□ -0.08
RAB40C-208ENST00000564703 CCDC106Q9BWC9 280 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 OR2B2Q9GZK3 357 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 ARMC7Q9H6L4 198 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 EFCAB1Q9HAE3 211 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 STOML1Q9UBI4 398 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 SH3BGRL2Q9UJC5 107 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 SLC5A6Q9Y289 635 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 CARD8Q9Y2G2 431 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 RPH3AQ9Y2J0 694 aaPredicted RBP14.53□□□□□ -0.08
RAB40C-208ENST00000564703 SLC6A5Q9Y345 797 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 LIPGQ9Y5X9 500 aa14.53□□□□□ -0.08
RAB40C-208ENST00000564703 POLEQ07864 2286 aa14.52□□□□□ -0.08
RAB40C-208ENST00000564703 TRBV5-3A0A0A0MS03 114 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 PRAMEF27A3QJZ7 478 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 CCL21O00585 134 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 LRRTM2O43300 516 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 KIAA0513O60268 411 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 AGFG2O95081 481 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 ACTL6AO96019 429 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 DBIP07108 87 aaKnown RBP14.52□□□□□ -0.09
RAB40C-208ENST00000564703 CHRM4P08173 479 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 UBL4AP11441 157 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 BMP2P12643 396 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 HOXB9P17482 250 aaPredicted RBP14.52□□□□□ -0.09
RAB40C-208ENST00000564703 SLC6A2P23975 617 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 ADH7P40394 386 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 P2RX1P51575 399 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 KCNJ10P78508 379 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 FUT5Q11128 374 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 ART3Q13508 389 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 GLYR1Q49A26 553 aaPredicted RBP14.52□□□□□ -0.09
RAB40C-208ENST00000564703 C4orf17Q53FE4 359 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 C1QL3Q5VWW1 255 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 REP15Q6BDI9 236 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 FRRS1Q6ZNA5 592 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 TMCO5AQ8N6Q1 288 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 POU5F2Q8N7G0 328 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 TOR1AIP2Q8NFQ8 470 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 ZG16BQ96DA0 208 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 C1GALT1C1Q96EU7 318 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 SFXN2Q96NB2 322 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 LRRC37BQ96QE4 947 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 ECSITQ9BQ95 431 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 PIGQQ9BRB3 760 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 SLC38A1Q9H2H9 487 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 A4GALTQ9NPC4 353 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 SUCOQ9UBS9 1254 aaKnown RBP14.52□□□□□ -0.09
RAB40C-208ENST00000564703 SLC35A3Q9Y2D2 325 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 NCKAP5O14513 1909 aa14.52□□□□□ -0.09
RAB40C-208ENST00000564703 A0A087WZY1 265 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 AGAP5A6NIR3 686 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 LINC01387J3KSC0 135 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 AIM2O14862 343 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 ZNHIT1O43257 154 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 ZIC3O60481 467 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 TNFRSF21O75509 655 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 NUDT7P0C024 238 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 BMP7P18075 431 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 TCEA1P23193 301 aaKnown RBP14.51□□□□□ -0.09
RAB40C-208ENST00000564703 CA7P43166 264 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 SUMO3P55854 103 aaPredicted RBP14.51□□□□□ -0.09
RAB40C-208ENST00000564703 CDK6Q00534 326 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 CAPRIN1Q14444 709 aaKnown RBP14.51□□□□□ -0.09
RAB40C-208ENST00000564703 LARS2Q15031 903 aaKnown RBP14.51□□□□□ -0.09
RAB40C-208ENST00000564703 CD226Q15762 336 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 C3AR1Q16581 482 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 CYP51A1Q16850 503 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 PRAMEF8Q5VWM4 474 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 PRAMEF7Q5VXH5 474 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 RAET1LQ5VY80 246 aa14.51□□□□□ -0.09
RAB40C-208ENST00000564703 NANOGP8Q6NSW7 305 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms