RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 ERI1Q8IV48 349 aaKnown RBP3.27□□□□□ -1.89
CHD9-212ENST00000564641 HDDC3Q8N4P3 179 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 MRPL43Q8N983 215 aaKnown RBP3.27□□□□□ -1.89
CHD9-212ENST00000564641 SPERTQ8NA61 448 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 NCOA7Q8NI08 942 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 SUN5Q8TC36 379 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 ACTRT1Q8TDG2 376 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 METTL21AQ8WXB1 218 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 RFT1Q96AA3 541 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 CCDC127Q96BQ5 260 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 MRPL38Q96DV4 380 aaKnown RBP3.27□□□□□ -1.89
CHD9-212ENST00000564641 FAM71F1Q96KD3 344 aaPredicted RBP3.27□□□□□ -1.89
CHD9-212ENST00000564641 CNOT6LQ96LI5 555 aaKnown RBP3.27□□□□□ -1.89
CHD9-212ENST00000564641 FMO2Q99518 471 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 ATG101Q9BSB4 218 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 SPZ1Q9BXG8 430 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 MRPS26Q9BYN8 205 aaKnown RBP3.27□□□□□ -1.89
CHD9-212ENST00000564641 SLC7A5P2Q9GIP4 190 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 NT5C3AQ9H0P0 336 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 TRPV6Q9H1D0 765 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 NEUROG2Q9H2A3 272 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 EHD1Q9H4M9 534 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 Q9H521 79 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 C10orf88Q9H8K7 445 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 JPT2Q9H910 190 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 AGPAT5Q9NUQ2 364 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 TMEM161AQ9NX61 479 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 SPG21Q9NZD8 308 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 TXNDC16Q9P2K2 825 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 MTRF1LQ9UGC7 380 aaKnown RBP3.27□□□□□ -1.89
CHD9-212ENST00000564641 MTCH2Q9Y6C9 303 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 KIAA1217Q5T5P2 1943 aa3.27□□□□□ -1.89
CHD9-212ENST00000564641 SPTBN5Q9NRC6 3674 aaKnown RBP3.26□□□□□ -1.89
CHD9-212ENST00000564641 GBF1Q92538 1859 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 NRCAMQ92823 1304 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 MICAL3Q7RTP6 2002 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 LOC105371267A0A1B0GV96 52 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 RSPH10B2B2RC85 870 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 CENPBD1B2RD01 187 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 TMEM114B3SHH9 223 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 PGRMC1O00264 195 aaKnown RBP3.26□□□□□ -1.89
CHD9-212ENST00000564641 RTCAO00442 366 aaKnown RBP3.26□□□□□ -1.89
CHD9-212ENST00000564641 ZBTB5O15062 677 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 SPAG7O75391 227 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 RAD51DO75771 328 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 AKAP3O75969 853 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 OR6B1O95007 311 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 CXCL10P02778 98 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 CCDC159P0C7I6 412 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 RSPH10BP0C881 870 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 POLR2MP0CAP2 368 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 CALM1P0DP23 149 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 CALM2P0DP24 149 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 CALM3P0DP25 149 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 HMOX2P30519 316 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 HNRNPH3P31942 346 aaKnown RBP3.26□□□□□ -1.89
CHD9-212ENST00000564641 GTF2H1P32780 548 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 S100A5P33763 92 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 KCNJ1P48048 391 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 GSSP48637 474 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 SLC26A2P50443 739 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 GPC3P51654 580 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 CLCN4P51793 760 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 SLC12A3P55017 1021 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 C21orf59P57076 290 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 DCDC1P59894 354 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 ILF2Q12905 390 aaKnown RBP3.26□□□□□ -1.89
CHD9-212ENST00000564641 VEZF1Q14119 521 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 C16orf72Q14CZ0 275 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 TGFBIQ15582 683 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 SGCBQ16585 318 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 HFEQ30201 348 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 CCDC14Q49A88 953 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 GPR33Q49SQ1 333 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 IQCCQ4KMZ1 466 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 ACSBG2Q5FVE4 666 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 C6orf183Q5T699 404 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 RFWD3Q6PCD5 774 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 CATSPER4Q7RTX7 472 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 NET1Q7Z628 596 aaPredicted RBP3.26□□□□□ -1.89
CHD9-212ENST00000564641 LRRC6Q86X45 466 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 ICA1LQ8NDH6 482 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 OR7G1Q8NGA0 311 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 OR10Q1Q8NGQ4 319 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 TYMSOSQ8TAI1 123 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 ACMSDQ8TDX5 336 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 PIK3R3Q92569 461 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 PROX1Q92786 737 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 BORCS5Q969J3 196 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 BSCL2Q96G97 398 aaPredicted RBP3.26□□□□□ -1.89
CHD9-212ENST00000564641 C5orf30Q96GV9 206 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 SNF8Q96H20 258 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 RUNDC3BQ96NL0 473 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 SERPINB12Q96P63 405 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 KLHL5Q96PQ7 755 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 CDCA3Q99618 268 aaPredicted RBP3.26□□□□□ -1.89
CHD9-212ENST00000564641 CCDC77Q9BR77 488 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 TUBGCP2Q9BSJ2 902 aa3.26□□□□□ -1.89
CHD9-212ENST00000564641 DDX47Q9H0S4 455 aaKnown RBP3.26□□□□□ -1.89
CHD9-212ENST00000564641 UBE2ZQ9H832 354 aaPredicted RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms