RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 WWTR1Q9GZV5 400 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 NXF5Q9H1B4 397 aaKnown RBP14.36□□□□□ -0.11
COMMD4-210ENST00000564587 ADNPQ9H2P0 1102 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 SEMA4GQ9NTN9 838 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 RYDENQ9NUL5 291 aaKnown RBP14.36□□□□□ -0.11
COMMD4-210ENST00000564587 SCN3BQ9NY72 215 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 TPRKBQ9Y3C4 175 aa14.36□□□□□ -0.11
COMMD4-210ENST00000564587 A0A087WUU8 490 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 NPIPA5A0A0B4J1W7 369 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 CENPVL1A0A0U1RR11 272 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 SMIM31A0A1B0GVY4 71 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 NPIPA7E9PJI5 369 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 SCDO00767 359 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 FRS3O43559 492 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 IGHEP01854 428 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 NGFRP08138 427 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 NPIPA8P0DM63 369 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 TBXA2RP21731 343 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 GPR143P51810 404 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 PNLIPRP2P54317 469 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 NRG3P56975 720 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 EIF3IQ13347 325 aaKnown RBP14.35□□□□□ -0.11
COMMD4-210ENST00000564587 OR1Q1Q15612 314 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 KLHL26Q53HC5 615 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 MBOAT2Q6ZWT7 520 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 CPEB2Q7Z5Q1 589 aaKnown RBP14.35□□□□□ -0.11
COMMD4-210ENST00000564587 ZAR1Q86SH2 424 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 ZNF614Q8N883 585 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 LSMEM1Q8N8F7 131 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 ZSCAN1Q8NBB4 408 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 OR5L2Q8NGL0 311 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 NUBPLQ8TB37 319 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 LIN37Q96GY3 246 aaPredicted RBP14.35□□□□□ -0.11
COMMD4-210ENST00000564587 MPP4Q96JB8 637 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 GAL3ST4Q96RP7 486 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 SPSB2Q99619 263 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 CTRCQ99895 268 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 IRF2BPLQ9H1B7 796 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 POLR1BQ9H9Y6 1135 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 VCX3AQ9NNX9 186 aa14.35□□□□□ -0.11
COMMD4-210ENST00000564587 DNAJB12Q9NXW2 375 aaKnown RBP14.35□□□□□ -0.11
COMMD4-210ENST00000564587 HTR3EA5X5Y0 456 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 CLDN24A6NM45 220 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 ZAR1LA6NP61 321 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 ABCB7O75027 752 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 ANGPTL1O95841 491 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 CSTAP01040 98 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 CCL4P13236 92 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 POU2F1P14859 743 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 CRHBPP24387 322 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 IL12BP29460 328 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 STAT5AP42229 794 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 EFNA3P52797 238 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 TSPAN31Q12999 210 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 MAD2L1BPQ15013 274 aaPredicted RBP14.34□□□□□ -0.11
COMMD4-210ENST00000564587 MEP1AQ16819 746 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 BROXQ5VW32 411 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 CDCP2Q5VXM1 449 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 HSDL2Q6YN16 418 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 LANCL3Q6ZV70 420 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 ZER1Q7Z7L7 766 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 C9orf40Q8IXQ3 194 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 ZNF321PQ8N8H1 164 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 ZNF441Q8N8Z8 693 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 NFAM1Q8NET5 270 aaPredicted RBP14.34□□□□□ -0.11
COMMD4-210ENST00000564587 TRUB1Q8WWH5 349 aaKnown RBP14.34□□□□□ -0.11
COMMD4-210ENST00000564587 CNOT9Q92600 299 aaKnown RBP14.34□□□□□ -0.11
COMMD4-210ENST00000564587 MR1Q95460 341 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 TAAR9Q96RI9 348 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 DDA1Q9BW61 102 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 ULBP3Q9BZM4 244 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 CCNB1IP1Q9NPC3 277 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 EXOSC3Q9NQT5 275 aaKnown RBP14.34□□□□□ -0.11
COMMD4-210ENST00000564587 IMPAD1Q9NX62 359 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 SELENONQ9NZV5 590 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 REV1Q9UBZ9 1251 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 TMEM5Q9Y2B1 443 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 LOXL2Q9Y4K0 774 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 PCDHGA6Q9Y5G7 932 aa14.34□□□□□ -0.11
COMMD4-210ENST00000564587 A0A1W2PQD3 144 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 REM1O75628 298 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 TFAP2AP05549 437 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 ATP6V1B1P15313 513 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 NAGAP17050 411 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 MMP11P24347 488 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 CHMP24386 653 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 EEF1B2P24534 225 aaKnown RBP14.33□□□□□ -0.12
COMMD4-210ENST00000564587 FPR3P25089 353 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 ELK4P28324 431 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 RBM34P42696 430 aaKnown RBP14.33□□□□□ -0.12
COMMD4-210ENST00000564587 GSSP48637 474 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 NR0B1P51843 470 aaKnown RBP14.33□□□□□ -0.12
COMMD4-210ENST00000564587 COPZ1P61923 177 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 RNF4P78317 190 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 PLCXD2Q0VAA5 305 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 PTGES3Q15185 160 aaKnown RBP14.33□□□□□ -0.12
COMMD4-210ENST00000564587 NNATQ16517 81 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 FAAH2Q6GMR7 532 aa14.33□□□□□ -0.12
COMMD4-210ENST00000564587 PAPD4Q6PIY7 484 aaKnown RBP14.33□□□□□ -0.12
COMMD4-210ENST00000564587 ZNF773Q6PK81 442 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms