RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 CDSNQ15517 529 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 ARHGAP11BQ3KRB8 267 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 DCST1Q5T197 706 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 SAXO2Q658L1 398 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 ZNF621Q6ZSS3 439 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 MSANTD1Q6ZTZ1 278 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 MAVSQ7Z434 540 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 ZAR1Q86SH2 424 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 MIER2Q8N344 545 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 MEIOBQ8N635 442 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 OR5D16Q8NGK9 328 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 B4GALNT2Q8NHY0 566 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 PHOSPHO1Q8TCT1 267 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 CKAP2Q8WWK9 683 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 OIT3Q8WWZ8 545 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 ZBTB8AQ96BR9 441 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 ZFP3Q96NJ6 502 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 OR52B2Q96RD2 323 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 SDF2Q99470 211 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 TM9SF2Q99805 663 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 SLC35A5Q9BS91 424 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 CCDC28BQ9BUN5 200 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 NMUR2Q9GZQ4 415 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 OR51I1Q9H343 314 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 SLC24A3Q9HC58 644 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 SLCO1B3Q9NPD5 702 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 TCF7L2Q9NQB0 619 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 POLE3Q9NRF9 147 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 FBXO34Q9NWN3 711 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 ZNF629Q9UEG4 869 aaPredicted RBP12.13□□□□□ -0.47
CLK3-216ENST00000564468 Q9UFV3 132 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 DTNAQ9Y4J8 743 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 CELSR1Q9NYQ6 3014 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 ITPR3Q14573 2671 aa12.13□□□□□ -0.47
CLK3-216ENST00000564468 OR2M5A3KFT3 312 aa12.12□□□□□ -0.47
CLK3-216ENST00000564468 MBD3L4A6NDZ8 208 aaPredicted RBP12.12□□□□□ -0.47
CLK3-216ENST00000564468 MBD3L3A6NE82 208 aaPredicted RBP12.12□□□□□ -0.47
CLK3-216ENST00000564468 CCDC154A6NI56 674 aa12.12□□□□□ -0.47
CLK3-216ENST00000564468 MBD3L5A6NJ08 208 aaPredicted RBP12.12□□□□□ -0.47
CLK3-216ENST00000564468 FAM90A27PA6NNH2 459 aa12.12□□□□□ -0.47
CLK3-216ENST00000564468 RFXANKO14593 260 aa12.12□□□□□ -0.47
CLK3-216ENST00000564468 SASH3O75995 380 aa12.12□□□□□ -0.47
CLK3-216ENST00000564468 KRT75O95678 551 aa12.12□□□□□ -0.47
CLK3-216ENST00000564468 GUSBP08236 651 aa12.12□□□□□ -0.47
CLK3-216ENST00000564468 ZNF708P17019 499 aa12.12□□□□□ -0.47
CLK3-216ENST00000564468 ZNF17P17021 662 aa12.12□□□□□ -0.47
CLK3-216ENST00000564468 TCEA1P23193 301 aaKnown RBP12.12□□□□□ -0.47
CLK3-216ENST00000564468 ADH7P40394 386 aa12.12□□□□□ -0.47
CLK3-216ENST00000564468 MAGEA8P43361 318 aa12.12□□□□□ -0.47
CLK3-216ENST00000564468 STARP49675 285 aa12.12□□□□□ -0.47
CLK3-216ENST00000564468 B3GALT5-AS1P59052 145 aa12.12□□□□□ -0.47
CLK3-216ENST00000564468 RPS3AP61247 264 aaKnown RBP12.12□□□□□ -0.47
CLK3-216ENST00000564468 RPS26P62854 115 aaKnown RBP12.12□□□□□ -0.47
CLK3-216ENST00000564468 EEF1A1P68104 462 aaKnown RBP12.12□□□□□ -0.47
CLK3-216ENST00000564468 KLHL26Q53HC5 615 aa12.12□□□□□ -0.47
CLK3-216ENST00000564468 EEF1A1P5Q5VTE0 462 aa12.12□□□□□ -0.47
CLK3-216ENST00000564468 MCEMP1Q8IX19 187 aa12.12□□□□□ -0.47
CLK3-216ENST00000564468 GATSQ8NAP1 163 aa12.12□□□□□ -0.47
CLK3-216ENST00000564468 MBD3L2Q8NHZ7 208 aaPredicted RBP12.12□□□□□ -0.47
CLK3-216ENST00000564468 XAGE5Q8WWM1 108 aa12.12□□□□□ -0.47
CLK3-216ENST00000564468 UCN2Q96RP3 112 aa12.12□□□□□ -0.47
CLK3-216ENST00000564468 SPOCK3Q9BQ16 436 aa12.12□□□□□ -0.47
CLK3-216ENST00000564468 TUBA1CQ9BQE3 449 aa12.12□□□□□ -0.47
CLK3-216ENST00000564468 AP4B1Q9Y6B7 739 aa12.12□□□□□ -0.47
CLK3-216ENST00000564468 KCNE3Q9Y6H6 103 aa12.12□□□□□ -0.47
CLK3-216ENST00000564468 MPDZO75970 2070 aa12.12□□□□□ -0.47
CLK3-216ENST00000564468 C17orf51A8MQB3 221 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 B4DXG7 233 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 HCRTR2O43614 444 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 EIF4E2O60573 245 aaKnown RBP12.11□□□□□ -0.47
CLK3-216ENST00000564468 TOXO94900 526 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 ANP32DO95626 131 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 OR12D1P0DN82 309 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 CTSSP25774 331 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 EIF1P41567 113 aaKnown RBP12.11□□□□□ -0.47
CLK3-216ENST00000564468 MRPL19P49406 292 aaKnown RBP12.11□□□□□ -0.47
CLK3-216ENST00000564468 IDH3AP50213 366 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 P2RX1P51575 399 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 POLR2JP52435 117 aaKnown RBP12.11□□□□□ -0.47
CLK3-216ENST00000564468 AQP5P55064 265 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 SUMO3P55854 103 aaPredicted RBP12.11□□□□□ -0.47
CLK3-216ENST00000564468 CLDN18P56856 261 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 HPCAP84074 193 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 GPR68Q15743 365 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 HEPHL1Q6MZM0 1159 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 TNFAIP8L2Q6P589 184 aaPredicted RBP12.11□□□□□ -0.47
CLK3-216ENST00000564468 SEM1Q6ZVN7 128 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 ADGRE4PQ86SQ3 457 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 CLEC4FQ8N1N0 589 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 ARFGAP2Q8N6H7 521 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 ZNF614Q8N883 585 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 TNIP2Q8NFZ5 429 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 STON2Q8WXE9 905 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 WNT2BQ93097 391 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 SH3YL1Q96HL8 342 aaPredicted RBP12.11□□□□□ -0.47
CLK3-216ENST00000564468 ITCHQ96J02 903 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 MARK4Q96L34 752 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 UCK2Q9BZX2 261 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 ENKD1Q9H0I2 346 aa12.11□□□□□ -0.47
CLK3-216ENST00000564468 SERHL2Q9H4I8 314 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms