RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 WFIKKN1Q96NZ8 548 aa13.48□□□□□ -0.25
SPG7-210ENST00000564409 PRRG4Q9BZD6 226 aa13.48□□□□□ -0.25
SPG7-210ENST00000564409 ANKZF1Q9H8Y5 726 aa13.48□□□□□ -0.25
SPG7-210ENST00000564409 PLSCR4Q9NRQ2 329 aa13.48□□□□□ -0.25
SPG7-210ENST00000564409 PROCRQ9UNN8 238 aa13.48□□□□□ -0.25
SPG7-210ENST00000564409 VDAC3Q9Y277 283 aa13.48□□□□□ -0.25
SPG7-210ENST00000564409 ARID1AO14497 2285 aa13.48□□□□□ -0.25
SPG7-210ENST00000564409 MAP1AP78559 2803 aaPredicted RBP13.47□□□□□ -0.25
SPG7-210ENST00000564409 TMEM233B4DJY2 109 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 H0YC42 278 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 H3BNH8 94 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 EIF1AYO14602 144 aaKnown RBP13.47□□□□□ -0.25
SPG7-210ENST00000564409 PEX11AO75192 247 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 SNUPNO95149 360 aaKnown RBP13.47□□□□□ -0.25
SPG7-210ENST00000564409 SYNGR4O95473 234 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 PLGP00747 810 aaPredicted RBP13.47□□□□□ -0.25
SPG7-210ENST00000564409 PABPC4LP0CB38 370 aaKnown RBP13.47□□□□□ -0.25
SPG7-210ENST00000564409 CD53P19397 219 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 ATP6V1C1P21283 382 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 CRYGSP22914 178 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 PSMA4P25789 261 aaKnown RBP13.47□□□□□ -0.25
SPG7-210ENST00000564409 KCNJ5P48544 419 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 CCT3P49368 545 aaKnown RBP13.47□□□□□ -0.25
SPG7-210ENST00000564409 TPD52P55327 224 aaPredicted RBP13.47□□□□□ -0.25
SPG7-210ENST00000564409 SUMO3P55854 103 aaPredicted RBP13.47□□□□□ -0.25
SPG7-210ENST00000564409 CTBP2P56545 445 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 FOXD4Q12950 439 aaPredicted RBP13.47□□□□□ -0.25
SPG7-210ENST00000564409 SMU1Q2TAY7 513 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 PLPPR5Q32ZL2 321 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 C6orf136Q5SQH8 315 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 SHEQ5VZ18 495 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 CDC73Q6P1J9 531 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 FIGNL1Q6PIW4 674 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 OR7A2PQ8NGA2 310 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 OR2W6PQ8NHA6 318 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 B4GALNT2Q8NHY0 566 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 SFXN5Q8TD22 340 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 JADE3Q92613 823 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 PIGTQ969N2 578 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 COQ8BQ96D53 544 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 PIP5K1AQ99755 562 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 MECRQ9BV79 373 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 TMEM109Q9BVC6 243 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 ACTRT3Q9BYD9 372 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 OPN3Q9H1Y3 402 aaPredicted RBP13.47□□□□□ -0.25
SPG7-210ENST00000564409 SIRT3Q9NTG7 399 aaPredicted RBP13.47□□□□□ -0.25
SPG7-210ENST00000564409 MED17Q9NVC6 651 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 SLC17A7Q9P2U7 560 aa13.47□□□□□ -0.25
SPG7-210ENST00000564409 FAF1Q9UNN5 650 aaPredicted RBP13.47□□□□□ -0.25
SPG7-210ENST00000564409 DSCAMO60469 2012 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 UQCRHLA0A096LP55 91 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 GJE1A6NN92 205 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 ARHGEF9O43307 516 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 SS18L1O75177 396 aaPredicted RBP13.46□□□□□ -0.25
SPG7-210ENST00000564409 AQP8O94778 261 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 LAMP1P11279 417 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 FPR1P21462 350 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 ELK4P28324 431 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 ADH6P28332 368 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 HOXC12P31275 282 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 EIF1AXP47813 144 aaKnown RBP13.46□□□□□ -0.25
SPG7-210ENST00000564409 C21orf58P58505 322 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 SIRPAP78324 504 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 STK32CQ86UX6 486 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 KIRREL3Q8IZU9 778 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 ZNF610Q8N9Z0 462 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 FNDC5Q8NAU1 212 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 OR10D3Q8NH80 312 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 ADAMTS15Q8TE58 950 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 C16orf58Q96GQ5 468 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 ADGRG7Q96K78 797 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 BHLHE41Q9C0J9 482 aaPredicted RBP13.46□□□□□ -0.25
SPG7-210ENST00000564409 TIGARQ9NQ88 270 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 DLL4Q9NR61 685 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 KLHL28Q9NXS3 571 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 SNX8Q9Y5X2 465 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 ACTL7BQ9Y614 415 aa13.46□□□□□ -0.25
SPG7-210ENST00000564409 HEATR5AQ86XA9 2040 aa13.46□□□□□ -0.26
SPG7-210ENST00000564409 DUXAA6NLW8 204 aa13.45□□□□□ -0.26
SPG7-210ENST00000564409 DEFB108AA8MXU0 73 aa13.45□□□□□ -0.26
SPG7-210ENST00000564409 SPAG7O75391 227 aa13.45□□□□□ -0.26
SPG7-210ENST00000564409 SLU7O95391 586 aaKnown RBP13.45□□□□□ -0.26
SPG7-210ENST00000564409 BPGMP07738 259 aa13.45□□□□□ -0.26
SPG7-210ENST00000564409 VSNL1P62760 191 aa13.45□□□□□ -0.26
SPG7-210ENST00000564409 TP53BP2Q13625 1128 aa13.45□□□□□ -0.26
SPG7-210ENST00000564409 LASP1Q14847 261 aaKnown RBP13.45□□□□□ -0.26
SPG7-210ENST00000564409 PTGR1Q14914 329 aa13.45□□□□□ -0.26
SPG7-210ENST00000564409 POU4F3Q15319 338 aa13.45□□□□□ -0.26
SPG7-210ENST00000564409 CTU2Q2VPK5 515 aaKnown RBP13.45□□□□□ -0.26
SPG7-210ENST00000564409 SPDYE7PQ495Y7 208 aa13.45□□□□□ -0.26
SPG7-210ENST00000564409 KLHL26Q53HC5 615 aa13.45□□□□□ -0.26
SPG7-210ENST00000564409 IL23RQ5VWK5 629 aa13.45□□□□□ -0.26
SPG7-210ENST00000564409 WDR93Q6P2C0 686 aa13.45□□□□□ -0.26
SPG7-210ENST00000564409 BEND4Q6ZU67 534 aa13.45□□□□□ -0.26
SPG7-210ENST00000564409 ZAR1Q86SH2 424 aa13.45□□□□□ -0.26
SPG7-210ENST00000564409 GALNT10Q86SR1 603 aa13.45□□□□□ -0.26
SPG7-210ENST00000564409 RIMKLAQ8IXN7 391 aa13.45□□□□□ -0.26
SPG7-210ENST00000564409 LRRC75A-AS1Q8N1F1 130 aa13.45□□□□□ -0.26
SPG7-210ENST00000564409 OR2V1Q8NHB1 315 aa13.45□□□□□ -0.26
SPG7-210ENST00000564409 FBXO30Q8TB52 745 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms