RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 LBPP18428 481 aa17.99■□□□□ 0.47
SHCBP1-203ENST00000564272 ATP6V1C1P21283 382 aa17.99■□□□□ 0.47
SHCBP1-203ENST00000564272 EEFSECP57772 596 aaKnown RBP17.99■□□□□ 0.47
SHCBP1-203ENST00000564272 ANKRD46Q86W74 232 aa17.99■□□□□ 0.47
SHCBP1-203ENST00000564272 KIRREL3Q8IZU9 778 aa17.99■□□□□ 0.47
SHCBP1-203ENST00000564272 OR4A15Q8NGL6 344 aa17.99■□□□□ 0.47
SHCBP1-203ENST00000564272 GPATCH1Q9BRR8 931 aaKnown RBP17.99■□□□□ 0.47
SHCBP1-203ENST00000564272 RBM24Q9BX46 236 aaKnown RBP17.99■□□□□ 0.47
SHCBP1-203ENST00000564272 MED17Q9NVC6 651 aa17.99■□□□□ 0.47
SHCBP1-203ENST00000564272 GALNT8Q9NY28 637 aa17.99■□□□□ 0.47
SHCBP1-203ENST00000564272 AP4B1Q9Y6B7 739 aa17.99■□□□□ 0.47
SHCBP1-203ENST00000564272 SPG11Q96JI7 2443 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 A0A087WZY1 265 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 RNF103-CHMP3A0A140T963 221 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 A0A1W2PQD3 144 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 RNASET2O00584 256 aaKnown RBP17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 ANKRD28O15084 1053 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 OIP5O43482 229 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 ERLIN1O75477 346 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 CTAG2O75638 210 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 ZNF17P17021 662 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 CPA2P48052 419 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 ZNF41P51814 821 aaPredicted RBP17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 MAGOHP61326 146 aaKnown RBP17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 ZNF117Q03924 483 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 PON3Q15166 354 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 PLPPR5Q32ZL2 321 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 BEND6Q5SZJ8 279 aaPredicted RBP17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 GGNQ86UU5 652 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 KIF18BQ86Y91 864 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 MISPQ8IVT2 679 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 GTPBP8Q8N3Z3 284 aaPredicted RBP17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 METTL25Q8N6Q8 603 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 CNEP1R1Q8N9A8 125 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 B4GALNT2Q8NHY0 566 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 LINC01560Q8TB33 94 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 FNDC9Q8TBE3 224 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 FAM222BQ8WU58 562 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 PIGMQ9H3S5 423 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 HHATLQ9HCP6 504 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 DNAJB12Q9NXW2 375 aaKnown RBP17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 MARCOQ9UEW3 520 aaPredicted RBP17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 PACSIN3Q9UKS6 424 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 AKAP9Q99996 3911 aa17.98■□□□□ 0.47
SHCBP1-203ENST00000564272 TUBAL3A6NHL2 446 aa17.97■□□□□ 0.47
SHCBP1-203ENST00000564272 SDHDO14521 159 aa17.97■□□□□ 0.47
SHCBP1-203ENST00000564272 SCN2BO60939 215 aa17.97■□□□□ 0.47
SHCBP1-203ENST00000564272 TNFRSF21O75509 655 aa17.97■□□□□ 0.47
SHCBP1-203ENST00000564272 OPN1LWP04000 364 aa17.97■□□□□ 0.47
SHCBP1-203ENST00000564272 CASP9P55211 416 aa17.97■□□□□ 0.47
SHCBP1-203ENST00000564272 NME5P56597 212 aa17.97■□□□□ 0.47
SHCBP1-203ENST00000564272 SIRPAP78324 504 aa17.97■□□□□ 0.47
SHCBP1-203ENST00000564272 PHC1P78364 1004 aa17.97■□□□□ 0.47
SHCBP1-203ENST00000564272 SORDQ00796 357 aa17.97■□□□□ 0.47
SHCBP1-203ENST00000564272 SPANXN4Q5MJ08 99 aa17.97■□□□□ 0.47
SHCBP1-203ENST00000564272 VWA1Q6PCB0 445 aa17.97■□□□□ 0.47
SHCBP1-203ENST00000564272 BHLHB9Q6PI77 547 aa17.97■□□□□ 0.47
SHCBP1-203ENST00000564272 C6orf120Q7Z4R8 191 aa17.97■□□□□ 0.47
SHCBP1-203ENST00000564272 OR8J2Q8NGG1 315 aa17.97■□□□□ 0.47
SHCBP1-203ENST00000564272 PHOSPHO1Q8TCT1 267 aa17.97■□□□□ 0.47
SHCBP1-203ENST00000564272 ACTRT2Q8TDY3 377 aa17.97■□□□□ 0.47
SHCBP1-203ENST00000564272 ZBTB8AQ96BR9 441 aa17.97■□□□□ 0.47
SHCBP1-203ENST00000564272 SLC35G5Q96KT7 338 aa17.97■□□□□ 0.47
SHCBP1-203ENST00000564272 RNF145Q96MT1 663 aa17.97■□□□□ 0.47
SHCBP1-203ENST00000564272 A6NNC1 897 aa17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 EIF1AYO14602 144 aaKnown RBP17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 SNNO75324 88 aaPredicted RBP17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 ALDOCP09972 364 aaKnown RBP17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 PSMA4P25789 261 aaKnown RBP17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 CPOXP36551 454 aa17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 RPS3AP61247 264 aaKnown RBP17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 NDUFAF6Q330K2 333 aa17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 KLHL26Q53HC5 615 aa17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 OR2A2Q6IF42 318 aa17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 OGFOD2Q6N063 350 aa17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 OLIG3Q7RTU3 272 aa17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 LRRC34Q8IZ02 419 aa17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 ZNF614Q8N883 585 aa17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 ZNF527Q8NB42 609 aa17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 POC1BQ8TC44 478 aa17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 TESCQ96BS2 214 aa17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 TLCD1Q96CP7 247 aa17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 STARD4Q96DR4 205 aa17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 POLDIP3Q9BY77 421 aaKnown RBP17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 TMEM185BQ9H7F4 350 aa17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 TMBIM4Q9HC24 238 aa17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 RASSF1Q9NS23 344 aa17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 THAP1Q9NVV9 213 aa17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 ZNF175Q9Y473 711 aa17.96■□□□□ 0.47
SHCBP1-203ENST00000564272 GOLGA8QA0A0J9YX86 632 aa17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 C7orf72A4D263 438 aa17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 GOLGA8OA6NCC3 632 aa17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 C9JVG2 144 aa17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 NPIPB9F8W1W9 429 aa17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 GOLGA8NF8WBI6 632 aa17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 SMNDC1O75940 238 aaKnown RBP eCLIP17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 AQP8O94778 261 aa17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 CPSF4O95639 269 aaKnown RBP17.95■□□□□ 0.46
SHCBP1-203ENST00000564272 CRHP06850 196 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms