RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 RHCEP18577 417 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 WT1P19544 449 aaPredicted RBP11.76□□□□□ -0.53
CLK3-214ENST00000564096 EIF2S3P41091 472 aaKnown RBP11.76□□□□□ -0.53
CLK3-214ENST00000564096 OR1E2P47887 323 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 SLC6A8P48029 635 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 CYB561P49447 251 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 SESN3P58005 492 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 SMIM11AP58511 58 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 VLDLRP98155 873 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 OC90Q02509 493 aaPredicted RBP11.76□□□□□ -0.53
CLK3-214ENST00000564096 SLC34A1Q06495 639 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 SNTA1Q13424 505 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 SNCBQ16143 134 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 DEFB109BQ30KR1 87 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 ZNF791Q3KP31 576 aaPredicted RBP11.76□□□□□ -0.53
CLK3-214ENST00000564096 GLIPR1L2Q4G1C9 344 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 B3GNTL1Q67FW5 361 aaPredicted RBP11.76□□□□□ -0.53
CLK3-214ENST00000564096 TMEM81Q6P7N7 255 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 IL20RBQ6UXL0 311 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 PLEKHM3Q6ZWE6 761 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 BEST3Q8N1M1 668 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 TOR1AIP2Q8NFQ8 470 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 OR10G3Q8NGC4 313 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 APOBEC4Q8WW27 367 aaKnown RBP11.76□□□□□ -0.53
CLK3-214ENST00000564096 GATA6Q92908 595 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 ZG16BQ96DA0 208 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 DTNBP1Q96EV8 351 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 PRRC1Q96M27 445 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 DCBLD2Q96PD2 775 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 ZNF300Q96RE9 604 aaPredicted RBP11.76□□□□□ -0.53
CLK3-214ENST00000564096 PIP5K1AQ99755 562 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 UTP23Q9BRU9 249 aaKnown RBP11.76□□□□□ -0.53
CLK3-214ENST00000564096 REEP1Q9H902 201 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 DNAJB12Q9NXW2 375 aaKnown RBP11.76□□□□□ -0.53
CLK3-214ENST00000564096 DNAJB9Q9UBS3 223 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 CFAP54Q96N23 3096 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 CLDN24A6NM45 220 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 TMEM229AB2RXF0 380 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 CLOCKO15516 846 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 HCRTR2O43614 444 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 FADS1O60427 444 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 EIF4E2O60573 245 aaKnown RBP11.75□□□□□ -0.53
CLK3-214ENST00000564096 DPM1O60762 260 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 E2F6O75461 281 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 CYP7B1O75881 506 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 ANGPTL1O95841 491 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 P04436 131 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 TNFRSF1BP20333 461 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 HLCSP50747 726 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 CCR4P51679 360 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 ARHGDIAP52565 204 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 SUMO3P55854 103 aaPredicted RBP11.75□□□□□ -0.53
CLK3-214ENST00000564096 TAS2R41P59536 307 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 COPZ1P61923 177 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 SPIBQ01892 262 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 SKP2Q13309 424 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 FNDC7Q5VTL7 733 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 FBXW10Q5XX13 1052 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 OR2T5Q6IEZ7 315 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 SLC30A6Q6NXT4 461 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 ISLR2Q6UXK2 745 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 APLFQ8IW19 511 aaPredicted RBP11.75□□□□□ -0.53
CLK3-214ENST00000564096 GATSQ8NAP1 163 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 CATSPER1Q8NEC5 780 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 FAM71CQ8NEG0 241 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 OR6T1Q8NGN1 323 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 OR2T29Q8NH02 315 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 GRHL3Q8TE85 626 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 LRTOMTQ8WZ04 291 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 PSMF1Q92530 271 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 TM9SF4Q92544 642 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 CENPNQ96H22 339 aaPredicted RBP11.75□□□□□ -0.53
CLK3-214ENST00000564096 C7orf34Q96L11 122 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 NODALQ96S42 347 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 ZNF559Q9BR84 538 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 RNF32Q9H0A6 362 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 VCXQ9H320 206 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 TIMMDC1Q9NPL8 285 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 RLIMQ9NVW2 624 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 STMN3Q9NZ72 180 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 FLRT3Q9NZU0 649 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 SELENONQ9NZV5 590 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 CNIH4Q9P003 139 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 NDUFAF4Q9P032 175 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 PPP4R1LQ9P1A2 415 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 WIF1Q9Y5W5 379 aa11.75□□□□□ -0.53
CLK3-214ENST00000564096 FAM47E-STBD1D6RA91 191 aa11.74□□□□□ -0.53
CLK3-214ENST00000564096 MAN1A2O60476 641 aa11.74□□□□□ -0.53
CLK3-214ENST00000564096 ZNF354AO60765 605 aaPredicted RBP11.74□□□□□ -0.53
CLK3-214ENST00000564096 OR5F1O95221 314 aa11.74□□□□□ -0.53
CLK3-214ENST00000564096 EPPINO95925 133 aa11.74□□□□□ -0.53
CLK3-214ENST00000564096 RNF144AP50876 292 aaPredicted RBP11.74□□□□□ -0.53
CLK3-214ENST00000564096 TMPRSS3P57727 454 aa11.74□□□□□ -0.53
CLK3-214ENST00000564096 C17orf67Q0P5P2 114 aa11.74□□□□□ -0.53
CLK3-214ENST00000564096 MFAP5Q13361 173 aa11.74□□□□□ -0.53
CLK3-214ENST00000564096 CBFBQ13951 182 aa11.74□□□□□ -0.53
CLK3-214ENST00000564096 TRIP10Q15642 601 aa11.74□□□□□ -0.53
CLK3-214ENST00000564096 CD226Q15762 336 aa11.74□□□□□ -0.53
CLK3-214ENST00000564096 MARCH3Q86UD3 253 aa11.74□□□□□ -0.53
CLK3-214ENST00000564096 OFCC1Q8IZS5 231 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms