RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 ZNF527Q8NB42 609 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 OR4C3Q8NH37 302 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 TTC9Q92623 222 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 HGDQ93099 445 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 TMCO6Q96DC7 493 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 SPACA9Q96E40 222 aaPredicted RBP11.86□□□□□ -0.51
SPG7-209ENST00000564047 PYURFQ96I23 114 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 DOHHQ9BU89 302 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 PINK1Q9BXM7 581 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 UGT2B28Q9BY64 529 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 CXorf56Q9H5V9 222 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 ZBTB20Q9HC78 741 aaPredicted RBP11.86□□□□□ -0.51
SPG7-209ENST00000564047 SCOCQ9UIL1 159 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 ANAPC2Q9UJX6 822 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 BAG5Q9UL15 447 aa11.86□□□□□ -0.51
SPG7-209ENST00000564047 ZNF443Q9Y2A4 671 aaPredicted RBP11.86□□□□□ -0.51
SPG7-209ENST00000564047 FLNCQ14315 2725 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 NPIPA5A0A0B4J1W7 369 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 DHRS12A0PJE2 317 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 NPIPA7E9PJI5 369 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 SYT5O00445 386 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 SCDO00767 359 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 ICOSLGO75144 302 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 DNAJB5O75953 348 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 NPIPA8P0DM63 369 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 NID1P14543 1247 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 HPGDP15428 266 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 PSMA4P25789 261 aaKnown RBP11.85□□□□□ -0.51
SPG7-209ENST00000564047 SLC7A1P30825 629 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 SOX3P41225 446 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 ERFP50548 548 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 SRSF1Q07955 248 aaKnown RBP eCLIP11.85□□□□□ -0.512e-8■□□□□ 8.5
SPG7-209ENST00000564047 LY6DQ14210 128 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 MAPK14Q16539 360 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 DUSP7Q16829 419 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 GRAMD1BQ3KR37 738 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 KLHL26Q53HC5 615 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 PDZK1Q5T2W1 519 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 ABHD17BQ5VST6 288 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 RNF220Q5VTB9 566 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 LPCAT4Q643R3 524 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 ENPP6Q6UWR7 440 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 HMGN2P46Q86SG4 172 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 VRK2Q86Y07 508 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 ADGRG5Q8IZF4 528 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 TMEM156Q8N614 296 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 FAM86B1Q8N7N1 296 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 SMYD1Q8NB12 490 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 ICA1LQ8NDH6 482 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 GPR32P1Q8NGA4 272 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 ASB15Q8WXK1 588 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 HSH2DQ96JZ2 352 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 SECISBP2Q96T21 854 aaKnown RBP11.85□□□□□ -0.51
SPG7-209ENST00000564047 RSPO3Q9BXY4 272 aaPredicted RBP11.85□□□□□ -0.51
SPG7-209ENST00000564047 Q9H521 79 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 MAGIXQ9H6Y5 334 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.85□□□□□ -0.51
SPG7-209ENST00000564047 STMN3Q9NZ72 180 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 ABI3Q9P2A4 366 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 RAB26Q9ULW5 256 aa11.85□□□□□ -0.51
SPG7-209ENST00000564047 CENPVL1A0A0U1RR11 272 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 A0A1W2PQD3 144 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 SERINC4A6NH21 518 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 ALG1L2C9J202 215 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 K7ENP7 123 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 TP53I11O14683 189 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 FADS1O60427 444 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 TPST1O60507 370 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 OR6B1O95007 311 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 OXSR1O95747 527 aaPredicted RBP11.84□□□□□ -0.51
SPG7-209ENST00000564047 FESP07332 822 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 ADH7P40394 386 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 HLCSP50747 726 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 FBXW4P57775 412 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 EEF1A1P68104 462 aaKnown RBP11.84□□□□□ -0.51
SPG7-209ENST00000564047 RPP38P78345 283 aaKnown RBP11.84□□□□□ -0.51
SPG7-209ENST00000564047 KCNJ10P78508 379 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 MED21Q13503 144 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 FGFBP1Q14512 234 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 FAM98BQ52LJ0 330 aaKnown RBP11.84□□□□□ -0.51
SPG7-209ENST00000564047 IFI44LQ53G44 452 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 EIPR1Q53HC9 387 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 AGAP7PQ5VUJ5 663 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 DESI1Q6ICB0 168 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 INO80CQ6PI98 192 aaPredicted RBP11.84□□□□□ -0.51
SPG7-209ENST00000564047 ZNF836Q6ZNA1 936 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 FKBP9P1Q75LS8 142 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 CMIPQ8IY22 773 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 POGLUT1Q8NBL1 392 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 PAPD5Q8NDF8 572 aaKnown RBP11.84□□□□□ -0.51
SPG7-209ENST00000564047 RNF138Q8WVD3 245 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 CANT1Q8WVQ1 401 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 PROX1Q92786 737 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 TPD52L3Q96J77 140 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 SGCZQ96LD1 299 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 AGAP4Q96P64 663 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 ARMC7Q9H6L4 198 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 EVA1AQ9H8M9 152 aa11.84□□□□□ -0.51
SPG7-209ENST00000564047 CCM2LQ9NUG4 571 aaPredicted RBP11.84□□□□□ -0.51
SPG7-209ENST00000564047 ARMC1Q9NVT9 282 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms