RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 ZBTB18Q99592 522 aa27.77■■■□□ 2.04
CMTM4-204ENST00000563952 TM9SF2Q99805 663 aa27.77■■■□□ 2.04
CMTM4-204ENST00000563952 CLCF1Q9UBD9 225 aa27.77■■■□□ 2.04
CMTM4-204ENST00000563952 ADGRG4Q8IZF6 3080 aa27.77■■■□□ 2.04
CMTM4-204ENST00000563952 DUXAA6NLW8 204 aa27.76■■■□□ 2.03
CMTM4-204ENST00000563952 LINC01387J3KSC0 135 aa27.76■■■□□ 2.03
CMTM4-204ENST00000563952 IL12AP29459 219 aa27.76■■■□□ 2.03
CMTM4-204ENST00000563952 SSTR2P30874 369 aa27.76■■■□□ 2.03
CMTM4-204ENST00000563952 ZNF614Q8N883 585 aa27.76■■■□□ 2.03
CMTM4-204ENST00000563952 MAELQ96JY0 434 aaKnown RBP27.76■■■□□ 2.03
CMTM4-204ENST00000563952 UCN2Q96RP3 112 aa27.76■■■□□ 2.03
CMTM4-204ENST00000563952 OR51I1Q9H343 314 aa27.76■■■□□ 2.03
CMTM4-204ENST00000563952 H0YC42 278 aa27.75■■■□□ 2.03
CMTM4-204ENST00000563952 HCRTR2O43614 444 aa27.75■■■□□ 2.03
CMTM4-204ENST00000563952 UQCRC1P31930 480 aa27.75■■■□□ 2.03
CMTM4-204ENST00000563952 CHI3L1P36222 383 aaPredicted RBP27.75■■■□□ 2.03
CMTM4-204ENST00000563952 ASCL1P50553 236 aa27.75■■■□□ 2.03
CMTM4-204ENST00000563952 ZNF41P51814 821 aaPredicted RBP27.75■■■□□ 2.03
CMTM4-204ENST00000563952 SUCLG1P53597 346 aaKnown RBP27.75■■■□□ 2.03
CMTM4-204ENST00000563952 TPD52P55327 224 aaPredicted RBP27.75■■■□□ 2.03
CMTM4-204ENST00000563952 B4GALNT2Q8NHY0 566 aa27.75■■■□□ 2.03
CMTM4-204ENST00000563952 LRRC8CQ8TDW0 803 aa27.75■■■□□ 2.03
CMTM4-204ENST00000563952 ACTRT2Q8TDY3 377 aa27.75■■■□□ 2.03
CMTM4-204ENST00000563952 INTS12Q96CB8 462 aaKnown RBP27.75■■■□□ 2.03
CMTM4-204ENST00000563952 CCDC115Q96NT0 180 aa27.75■■■□□ 2.03
CMTM4-204ENST00000563952 OR52E6Q96RD3 313 aa27.75■■■□□ 2.03
CMTM4-204ENST00000563952 SDF2Q99470 211 aa27.75■■■□□ 2.03
CMTM4-204ENST00000563952 A0A087WZY1 265 aa27.74■■■□□ 2.03
CMTM4-204ENST00000563952 DIAPH2O60879 1101 aa27.74■■■□□ 2.03
CMTM4-204ENST00000563952 IDO1P14902 403 aa27.74■■■□□ 2.03
CMTM4-204ENST00000563952 H2AFXP16104 143 aaPredicted RBP27.74■■■□□ 2.03
CMTM4-204ENST00000563952 OPRM1P35372 400 aa27.74■■■□□ 2.03
CMTM4-204ENST00000563952 ATP12AP54707 1039 aa27.74■■■□□ 2.03
CMTM4-204ENST00000563952 DLX5P56178 289 aa27.74■■■□□ 2.03
CMTM4-204ENST00000563952 FOXF2Q12947 444 aa27.74■■■□□ 2.03
CMTM4-204ENST00000563952 TMEM44Q2T9K0 475 aa27.74■■■□□ 2.03
CMTM4-204ENST00000563952 KLHL26Q53HC5 615 aa27.74■■■□□ 2.03
CMTM4-204ENST00000563952 DDX59Q5T1V6 619 aaKnown RBP eCLIP27.74■■■□□ 2.03
CMTM4-204ENST00000563952 TNFAIP8L2Q6P589 184 aaPredicted RBP27.74■■■□□ 2.03
CMTM4-204ENST00000563952 C16orf62Q7Z3J2 963 aa27.74■■■□□ 2.03
CMTM4-204ENST00000563952 P4HA3Q7Z4N8 544 aa27.74■■■□□ 2.03
CMTM4-204ENST00000563952 GCNT2Q8N0V5 402 aa27.74■■■□□ 2.03
CMTM4-204ENST00000563952 OR52B2Q96RD2 323 aa27.74■■■□□ 2.03
CMTM4-204ENST00000563952 SH3GL2Q99962 352 aa27.74■■■□□ 2.03
CMTM4-204ENST00000563952 KLHDC3Q9BQ90 382 aa27.74■■■□□ 2.03
CMTM4-204ENST00000563952 SLC35A5Q9BS91 424 aa27.74■■■□□ 2.03
CMTM4-204ENST00000563952 MED17Q9NVC6 651 aa27.74■■■□□ 2.03
CMTM4-204ENST00000563952 BTNL2Q9UIR0 455 aa27.74■■■□□ 2.03
CMTM4-204ENST00000563952 USH1CQ9Y6N9 552 aa27.74■■■□□ 2.03
CMTM4-204ENST00000563952 EEF1E1-BLOC1S5C9J1V9 151 aa27.73■■■□□ 2.03
CMTM4-204ENST00000563952 H3BNH8 94 aa27.73■■■□□ 2.03
CMTM4-204ENST00000563952 ZNF195O14628 629 aa27.73■■■□□ 2.03
CMTM4-204ENST00000563952 EEF1E1O43324 174 aaKnown RBP27.73■■■□□ 2.03
CMTM4-204ENST00000563952 RCBTB2O95199 551 aa27.73■■■□□ 2.03
CMTM4-204ENST00000563952 PGRP06401 933 aa27.73■■■□□ 2.03
CMTM4-204ENST00000563952 CLDN15P56746 228 aa27.73■■■□□ 2.03
CMTM4-204ENST00000563952 CLDN20P56880 219 aa27.73■■■□□ 2.03
CMTM4-204ENST00000563952 EEFSECP57772 596 aaKnown RBP27.73■■■□□ 2.03
CMTM4-204ENST00000563952 ZNF117Q03924 483 aa27.73■■■□□ 2.03
CMTM4-204ENST00000563952 TLE4Q04727 773 aa27.73■■■□□ 2.03
CMTM4-204ENST00000563952 SNTB1Q13884 538 aaKnown RBP27.73■■■□□ 2.03
CMTM4-204ENST00000563952 SAXO2Q658L1 398 aa27.73■■■□□ 2.03
CMTM4-204ENST00000563952 OLIG3Q7RTU3 272 aa27.73■■■□□ 2.03
CMTM4-204ENST00000563952 MTERF4Q7Z6M4 381 aaKnown RBP27.73■■■□□ 2.03
CMTM4-204ENST00000563952 CHDHQ8NE62 594 aaPredicted RBP27.73■■■□□ 2.03
CMTM4-204ENST00000563952 DYDC1Q8WWB3 177 aa27.73■■■□□ 2.03
CMTM4-204ENST00000563952 C14orf79Q96F83 325 aa27.73■■■□□ 2.03
CMTM4-204ENST00000563952 LRRC46Q96FV0 321 aa27.73■■■□□ 2.03
CMTM4-204ENST00000563952 PANX1Q96RD7 426 aa27.73■■■□□ 2.03
CMTM4-204ENST00000563952 EXD2Q9NVH0 621 aa27.73■■■□□ 2.03
CMTM4-204ENST00000563952 AP4B1Q9Y6B7 739 aa27.73■■■□□ 2.03
CMTM4-204ENST00000563952 GTPBP1O00178 669 aaKnown RBP27.72■■■□□ 2.03
CMTM4-204ENST00000563952 OIP5O43482 229 aa27.72■■■□□ 2.03
CMTM4-204ENST00000563952 TGM6O95932 706 aa27.72■■■□□ 2.03
CMTM4-204ENST00000563952 AK1P00568 194 aa27.72■■■□□ 2.03
CMTM4-204ENST00000563952 OR12D1P0DN82 309 aa27.72■■■□□ 2.03
CMTM4-204ENST00000563952 ZNF17P17021 662 aa27.72■■■□□ 2.03
CMTM4-204ENST00000563952 GPR68Q15743 365 aa27.72■■■□□ 2.03
CMTM4-204ENST00000563952 PLPPR5Q32ZL2 321 aa27.72■■■□□ 2.03
CMTM4-204ENST00000563952 PDCD4Q53EL6 469 aaKnown RBP27.72■■■□□ 2.03
CMTM4-204ENST00000563952 MIPOL1Q8TD10 442 aa27.72■■■□□ 2.03
CMTM4-204ENST00000563952 XAGE5Q8WWM1 108 aa27.72■■■□□ 2.03
CMTM4-204ENST00000563952 RAB8BQ92930 207 aa27.72■■■□□ 2.03
CMTM4-204ENST00000563952 ZBTB8AQ96BR9 441 aa27.72■■■□□ 2.03
CMTM4-204ENST00000563952 NEURL3Q96EH8 262 aa27.72■■■□□ 2.03
CMTM4-204ENST00000563952 C7orf26Q96N11 449 aa27.72■■■□□ 2.03
CMTM4-204ENST00000563952 ZFP3Q96NJ6 502 aa27.72■■■□□ 2.03
CMTM4-204ENST00000563952 NPAS1Q99742 590 aa27.72■■■□□ 2.03
CMTM4-204ENST00000563952 INPP5KQ9BT40 448 aa27.72■■■□□ 2.03
CMTM4-204ENST00000563952 PINK1Q9BXM7 581 aa27.72■■■□□ 2.03
CMTM4-204ENST00000563952 VIPAS39Q9H9C1 493 aa27.72■■■□□ 2.03
CMTM4-204ENST00000563952 CARD8Q9Y2G2 431 aa27.72■■■□□ 2.03
CMTM4-204ENST00000563952 DTNAQ9Y4J8 743 aa27.72■■■□□ 2.03
CMTM4-204ENST00000563952 ABCA12Q86UK0 2595 aa27.72■■■□□ 2.03
CMTM4-204ENST00000563952 SLC22A20A6NK97 555 aa27.71■■■□□ 2.03
CMTM4-204ENST00000563952 HMGB1P1B2RPK0 211 aaPredicted RBP27.71■■■□□ 2.03
CMTM4-204ENST00000563952 NPIPB9F8W1W9 429 aa27.71■■■□□ 2.03
CMTM4-204ENST00000563952 SYT5O00445 386 aa27.71■■■□□ 2.03
CMTM4-204ENST00000563952 UBDO15205 165 aa27.71■■■□□ 2.03
CMTM4-204ENST00000563952 STX11O75558 287 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms