RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 OIT3Q8WWZ8 545 aa12.13□□□□□ -0.47
CLK3-213ENST00000563842 MARVELD3Q96A59 401 aa12.13□□□□□ -0.47
CLK3-213ENST00000563842 ZBTB8AQ96BR9 441 aa12.13□□□□□ -0.47
CLK3-213ENST00000563842 ZFP3Q96NJ6 502 aa12.13□□□□□ -0.47
CLK3-213ENST00000563842 OR52B2Q96RD2 323 aa12.13□□□□□ -0.47
CLK3-213ENST00000563842 SDF2Q99470 211 aa12.13□□□□□ -0.47
CLK3-213ENST00000563842 TM9SF2Q99805 663 aa12.13□□□□□ -0.47
CLK3-213ENST00000563842 SLC35A5Q9BS91 424 aa12.13□□□□□ -0.47
CLK3-213ENST00000563842 CCDC28BQ9BUN5 200 aa12.13□□□□□ -0.47
CLK3-213ENST00000563842 NMUR2Q9GZQ4 415 aa12.13□□□□□ -0.47
CLK3-213ENST00000563842 OR51I1Q9H343 314 aa12.13□□□□□ -0.47
CLK3-213ENST00000563842 SLC24A3Q9HC58 644 aa12.13□□□□□ -0.47
CLK3-213ENST00000563842 SLCO1B3Q9NPD5 702 aa12.13□□□□□ -0.47
CLK3-213ENST00000563842 TCF7L2Q9NQB0 619 aa12.13□□□□□ -0.47
CLK3-213ENST00000563842 POLE3Q9NRF9 147 aa12.13□□□□□ -0.47
CLK3-213ENST00000563842 FBXO34Q9NWN3 711 aa12.13□□□□□ -0.47
CLK3-213ENST00000563842 ZNF629Q9UEG4 869 aaPredicted RBP12.13□□□□□ -0.47
CLK3-213ENST00000563842 Q9UFV3 132 aa12.13□□□□□ -0.47
CLK3-213ENST00000563842 DTNAQ9Y4J8 743 aa12.13□□□□□ -0.47
CLK3-213ENST00000563842 C2CD3Q4AC94 2353 aa12.13□□□□□ -0.47
CLK3-213ENST00000563842 NBPF19A0A087WUL8 3843 aa12.12□□□□□ -0.47
CLK3-213ENST00000563842 OR2M5A3KFT3 312 aa12.12□□□□□ -0.47
CLK3-213ENST00000563842 MBD3L4A6NDZ8 208 aaPredicted RBP12.12□□□□□ -0.47
CLK3-213ENST00000563842 MBD3L3A6NE82 208 aaPredicted RBP12.12□□□□□ -0.47
CLK3-213ENST00000563842 CCDC154A6NI56 674 aa12.12□□□□□ -0.47
CLK3-213ENST00000563842 MBD3L5A6NJ08 208 aaPredicted RBP12.12□□□□□ -0.47
CLK3-213ENST00000563842 FAM90A27PA6NNH2 459 aa12.12□□□□□ -0.47
CLK3-213ENST00000563842 RFXANKO14593 260 aa12.12□□□□□ -0.47
CLK3-213ENST00000563842 SASH3O75995 380 aa12.12□□□□□ -0.47
CLK3-213ENST00000563842 KRT75O95678 551 aa12.12□□□□□ -0.47
CLK3-213ENST00000563842 GUSBP08236 651 aa12.12□□□□□ -0.47
CLK3-213ENST00000563842 ZNF708P17019 499 aa12.12□□□□□ -0.47
CLK3-213ENST00000563842 ZNF17P17021 662 aa12.12□□□□□ -0.47
CLK3-213ENST00000563842 TCEA1P23193 301 aaKnown RBP12.12□□□□□ -0.47
CLK3-213ENST00000563842 ADH7P40394 386 aa12.12□□□□□ -0.47
CLK3-213ENST00000563842 MAGEA8P43361 318 aa12.12□□□□□ -0.47
CLK3-213ENST00000563842 STARP49675 285 aa12.12□□□□□ -0.47
CLK3-213ENST00000563842 B3GALT5-AS1P59052 145 aa12.12□□□□□ -0.47
CLK3-213ENST00000563842 RPS3AP61247 264 aaKnown RBP12.12□□□□□ -0.47
CLK3-213ENST00000563842 RPS26P62854 115 aaKnown RBP12.12□□□□□ -0.47
CLK3-213ENST00000563842 EEF1A1P68104 462 aaKnown RBP12.12□□□□□ -0.47
CLK3-213ENST00000563842 KLHL26Q53HC5 615 aa12.12□□□□□ -0.47
CLK3-213ENST00000563842 EEF1A1P5Q5VTE0 462 aa12.12□□□□□ -0.47
CLK3-213ENST00000563842 GATSQ8NAP1 163 aa12.12□□□□□ -0.47
CLK3-213ENST00000563842 MBD3L2Q8NHZ7 208 aaPredicted RBP12.12□□□□□ -0.47
CLK3-213ENST00000563842 XAGE5Q8WWM1 108 aa12.12□□□□□ -0.47
CLK3-213ENST00000563842 UCN2Q96RP3 112 aa12.12□□□□□ -0.47
CLK3-213ENST00000563842 SPOCK3Q9BQ16 436 aa12.12□□□□□ -0.47
CLK3-213ENST00000563842 TUBA1CQ9BQE3 449 aa12.12□□□□□ -0.47
CLK3-213ENST00000563842 AP4B1Q9Y6B7 739 aa12.12□□□□□ -0.47
CLK3-213ENST00000563842 KCNE3Q9Y6H6 103 aa12.12□□□□□ -0.47
CLK3-213ENST00000563842 MPDZO75970 2070 aa12.12□□□□□ -0.47
CLK3-213ENST00000563842 C17orf51A8MQB3 221 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 B4DXG7 233 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 HCRTR2O43614 444 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 EIF4E2O60573 245 aaKnown RBP12.11□□□□□ -0.47
CLK3-213ENST00000563842 TOXO94900 526 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 ANP32DO95626 131 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 OR12D1P0DN82 309 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 CTSSP25774 331 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 EIF1P41567 113 aaKnown RBP12.11□□□□□ -0.47
CLK3-213ENST00000563842 MRPL19P49406 292 aaKnown RBP12.11□□□□□ -0.47
CLK3-213ENST00000563842 IDH3AP50213 366 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 P2RX1P51575 399 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 POLR2JP52435 117 aaKnown RBP12.11□□□□□ -0.47
CLK3-213ENST00000563842 AQP5P55064 265 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 SUMO3P55854 103 aaPredicted RBP12.11□□□□□ -0.47
CLK3-213ENST00000563842 CLDN18P56856 261 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 HPCAP84074 193 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 GPR68Q15743 365 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 HEPHL1Q6MZM0 1159 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 TNFAIP8L2Q6P589 184 aaPredicted RBP12.11□□□□□ -0.47
CLK3-213ENST00000563842 SEM1Q6ZVN7 128 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 ADGRE4PQ86SQ3 457 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 CLEC4FQ8N1N0 589 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 ARFGAP2Q8N6H7 521 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 ZNF614Q8N883 585 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 TNIP2Q8NFZ5 429 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 STON2Q8WXE9 905 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 WNT2BQ93097 391 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 SH3YL1Q96HL8 342 aaPredicted RBP12.11□□□□□ -0.47
CLK3-213ENST00000563842 ITCHQ96J02 903 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 MARK4Q96L34 752 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 UCK2Q9BZX2 261 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 ENKD1Q9H0I2 346 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 SERHL2Q9H4I8 314 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 LIPT1Q9Y234 373 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 VDAC3Q9Y277 283 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 ZNF337Q9Y3M9 751 aa12.11□□□□□ -0.47
CLK3-213ENST00000563842 CELSR2Q9HCU4 2923 aa12.1□□□□□ -0.47
CLK3-213ENST00000563842 FAM234BA2RU67 622 aa12.1□□□□□ -0.47
CLK3-213ENST00000563842 C7orf72A4D263 438 aa12.1□□□□□ -0.47
CLK3-213ENST00000563842 NKX2-6A6NCS4 301 aa12.1□□□□□ -0.47
CLK3-213ENST00000563842 CLCA1A8K7I4 914 aa12.1□□□□□ -0.47
CLK3-213ENST00000563842 C9JVG2 144 aa12.1□□□□□ -0.47
CLK3-213ENST00000563842 NPIPB9F8W1W9 429 aa12.1□□□□□ -0.47
CLK3-213ENST00000563842 H3BML4 177 aa12.1□□□□□ -0.47
CLK3-213ENST00000563842 GMFGO60234 142 aa12.1□□□□□ -0.47
CLK3-213ENST00000563842 NUDT14O95848 222 aa12.1□□□□□ -0.47
CLK3-213ENST00000563842 IL18BPO95998 194 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms