RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 OR13C3Q8NGS6 347 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 FGFBP3Q8TAT2 258 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 TMEM37Q8WXS4 190 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 ARNTL2Q8WYA1 636 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 SLC38A4Q969I6 547 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 MRGPRFQ96AM1 343 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 OTULINQ96BN8 352 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 SGK494Q96LW2 274 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 SLC29A1Q99808 456 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 MIS12Q9H081 205 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 OPN3Q9H1Y3 402 aaPredicted RBP4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 MRPS30Q9NP92 439 aaKnown RBP4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 AKIP1Q9NQ31 210 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 CNGB3Q9NQW8 809 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 MIOSQ9NXC5 875 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 UTS2RQ9UKP6 389 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 DIMT1Q9UNQ2 313 aaKnown RBP4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 POFUT2Q9Y2G5 429 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 WDR45Q9Y484 360 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 ETV7Q9Y603 341 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 HS3ST3A1Q9Y663 406 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 GRIN2DO15399 1336 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 UMODL1Q5DID0 1318 aa4.7□□□□□ -1.66
VPS35P1-201ENST00000563400 PPIAL4EA0A075B759 164 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 A0A1W2PP11 408 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 SMCO3A2RU48 225 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 FBLL1A6NHQ2 334 aaKnown RBP4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 C9orf118A6NHY6 69 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 SERPINE3A8MV23 424 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 J3KR12 359 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 HUS1O60921 280 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 SH3BGRLO75368 114 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 OR5F1O95221 314 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 NDUFA10O95299 355 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 ANP32DO95626 131 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 FGF19O95750 216 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 CALCAP01258 141 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 APRTP07741 180 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 GSTT2P0CG29 244 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 GSTT2BP0CG30 244 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 PPIAL4FP0DN26 164 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 PRF1P14222 555 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 NDUFB7P17568 137 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 CD58P19256 250 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 RPS19P39019 145 aaKnown RBP4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 CRATP43155 626 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 ACADSBP45954 432 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 GLIPR1P48060 266 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 PPP3CCP48454 512 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 PLA2G16P53816 162 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 ATP1B3P54709 279 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 MAZP56270 477 aaKnown RBP4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 TUBA1BP68363 451 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 MYL7Q01449 175 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 PAX5Q02548 391 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 KDSRQ06136 332 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 MGAT3Q09327 533 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 CYLC2Q14093 348 aaPredicted RBP4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 KRT81Q14533 505 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 USF2Q15853 346 aaPredicted RBP4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 ETFDHQ16134 617 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 SGSM1Q2NKQ1 1148 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 RAB6CQ53S08 254 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 ZNF470Q6ECI4 717 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 TUBA1AQ71U36 451 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 NLRP9Q7RTR0 991 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 CYP4Z1Q86W10 505 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 LRRC6Q86X45 466 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 ZNF761Q86XN6 746 aaPredicted RBP4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 RBM45Q8IUH3 476 aaKnown RBP4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 LGI2Q8N0V4 545 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 GABRG1Q8N1C3 465 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 CLEC4FQ8N1N0 589 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 LNX2Q8N448 690 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 CEP112Q8N8E3 955 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 COLGALT1Q8NBJ5 622 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 CHDHQ8NE62 594 aaPredicted RBP4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 PROKR2Q8NFJ6 384 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 OR11H4Q8NGC9 324 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 OR5T3Q8NGG3 340 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 OR6M1Q8NGM8 313 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 WDR36Q8NI36 951 aaKnown RBP4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 RNF128Q8TEB7 428 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 TSACCQ96A04 125 aaPredicted RBP4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 C10orf35Q96D05 121 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 GNRHR2Q96P88 292 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 AGPAT1Q99943 283 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 RAB6CQ9H0N0 254 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 HDHD2Q9H0R4 259 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 OR52A5Q9H2C5 316 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 LRRC19Q9H756 370 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 ACKR4Q9NPB9 350 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 NOX4Q9NPH5 578 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 MS4A12Q9NXJ0 267 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 DAPK2Q9UIK4 370 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 RPH3ALQ9UNE2 315 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 LAMP3Q9UQV4 416 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 PPIAL4AQ9Y536 164 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 OR1A2Q9Y585 309 aa4.69□□□□□ -1.66
VPS35P1-201ENST00000563400 SCN10AQ9Y5Y9 1956 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms