RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 QSOX2Q6ZRP7 698 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 ZAR1Q86SH2 424 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 GPR135Q8IZ08 494 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 SLC43A2Q8N370 569 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 METTL27Q8N6F8 245 aaPredicted RBP11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 ZNF615Q8N8J6 731 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 KBTBD8Q8NFY9 601 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 NDNFQ8TB73 568 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 DYNC2LI1Q8TCX1 351 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 TMEM239Q8WW34 195 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 CNOT9Q92600 299 aaKnown RBP11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 LRR1Q96L50 414 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 NDC1Q9BTX1 674 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 DUSP23Q9BVJ7 150 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 MND1Q9BWT6 205 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 PALMDQ9NP74 551 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 DNAJB12Q9NXW2 375 aaKnown RBP11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 CFL2Q9Y281 166 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 ERGIC3Q9Y282 383 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 TMEM184BQ9Y519 407 aaPredicted RBP11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 ADAMTS20P59510 1910 aa11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 COL5A1P20908 1838 aaPredicted RBP11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 TNRC6BQ9UPQ9 1833 aaKnown RBP11.7□□□□□ -0.54
AC055717.2-201ENST00000561864 IGKV3D-11A0A0A0MRZ8 115 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 A0A0B4J2E0 115 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 A0A1B0GX12 115 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 HRKO00198 91 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 YKT6O15498 198 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 IGKV1D-16P01601 117 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 CLPSP04118 112 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 GKN3PP0CG01 181 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 FBLP22087 321 aaKnown RBP11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 NR4A1P22736 598 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 GADD45AP24522 165 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 GRK5P34947 590 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 RGS6P49758 472 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 SEPHS1P49903 392 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 ENTPD1P49961 510 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 PGDP52209 483 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 CTBP2P56545 445 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 NCS1P62166 190 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 TUBA1BP68363 451 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 BNC1Q01954 994 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 PLAURQ03405 335 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 CFHR1Q03591 330 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 RAB40BQ12829 278 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 SQSTM1Q13501 440 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 COL9A2Q14055 689 aaPredicted RBP11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 TTLL10Q6ZVT0 673 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 TMPRSS11FQ6ZWK6 438 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 USP43Q70EL4 1123 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 TUBA1AQ71U36 451 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 ZNF440Q8IYI8 595 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 CDK20Q8IZL9 346 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 PROKR2Q8NFJ6 384 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 OR2T33Q8NG76 320 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 OR1L3Q8NH93 324 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 C16orf52Q8NHV5 167 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 RFKQ969G6 155 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 LGALS12Q96DT0 336 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 VMP1Q96GC9 406 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 PLEKHA8Q96JA3 519 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 PTCHD1Q96NR3 888 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 SLC46A1Q96NT5 459 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 HOXD1Q9GZZ0 328 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 ZNF768Q9H5H4 540 aaKnown RBP11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 CAPN10Q9HC96 672 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 FGF20Q9NP95 211 aaPredicted RBP11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 PRMT8Q9NR22 394 aaPredicted RBP11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 CBLCQ9ULV8 474 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 DTX4Q9Y2E6 619 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 LSM2Q9Y333 95 aaKnown RBP11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 MED31Q9Y3C7 131 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 OR10H1Q9Y4A9 318 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 PCDHGA3Q9Y5H0 932 aa11.69□□□□□ -0.54
AC055717.2-201ENST00000561864 EFCAB7A8K855 629 aa11.68□□□□□ -0.54
AC055717.2-201ENST00000561864 C17orf105B2RV13 164 aa11.68□□□□□ -0.54
AC055717.2-201ENST00000561864 CCRL2O00421 344 aa11.68□□□□□ -0.54
AC055717.2-201ENST00000561864 SURF4O15260 269 aa11.68□□□□□ -0.54
AC055717.2-201ENST00000561864 RCBTB2O95199 551 aa11.68□□□□□ -0.54
AC055717.2-201ENST00000561864 CT45A8P0DMV1 189 aa11.68□□□□□ -0.54
AC055717.2-201ENST00000561864 CT45A9P0DMV2 189 aa11.68□□□□□ -0.54
AC055717.2-201ENST00000561864 IFI30P13284 250 aa11.68□□□□□ -0.54
AC055717.2-201ENST00000561864 ENDOUP21128 410 aaKnown RBP11.68□□□□□ -0.54
AC055717.2-201ENST00000561864 CALRP27797 417 aaKnown RBP11.68□□□□□ -0.54
AC055717.2-201ENST00000561864 LCN1P31025 176 aa11.68□□□□□ -0.54
AC055717.2-201ENST00000561864 RFX3P48380 749 aa11.68□□□□□ -0.54
AC055717.2-201ENST00000561864 DHPSP49366 369 aaPredicted RBP11.68□□□□□ -0.54
AC055717.2-201ENST00000561864 VBP1P61758 197 aa11.68□□□□□ -0.54
AC055717.2-201ENST00000561864 SRSF5Q13243 272 aaKnown RBP11.68□□□□□ -0.54
AC055717.2-201ENST00000561864 C1DQ13901 141 aaKnown RBP11.68□□□□□ -0.54
AC055717.2-201ENST00000561864 NR0B2Q15466 257 aa11.68□□□□□ -0.54
AC055717.2-201ENST00000561864 MED22Q15528 200 aa11.68□□□□□ -0.54
AC055717.2-201ENST00000561864 ELAVL1Q15717 326 aaKnown RBP11.68□□□□□ -0.54
AC055717.2-201ENST00000561864 CT45A2Q5DJT8 189 aa11.68□□□□□ -0.54
AC055717.2-201ENST00000561864 PMS2CLQ68D20 193 aa11.68□□□□□ -0.54
AC055717.2-201ENST00000561864 C19orf48Q6RUI8 117 aa11.68□□□□□ -0.54
AC055717.2-201ENST00000561864 KANSL1Q7Z3B3 1105 aa11.68□□□□□ -0.54
AC055717.2-201ENST00000561864 ADCK1Q86TW2 530 aa11.68□□□□□ -0.54
AC055717.2-201ENST00000561864 SLCO6A1Q86UG4 719 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms