RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 RNPEPL1Q9HAU8 725 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 PDFQ9HBH1 243 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 ZNF304Q9HCX3 659 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 ALKBH4Q9NXW9 302 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 UTP6Q9NYH9 597 aaKnown RBP2.94□□□□□ -1.94
SPG11-225ENST00000561391 TAS2R1Q9NYW7 299 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 HSF4Q9ULV5 492 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 DHDHQ9UQ10 334 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 LAMP3Q9UQV4 416 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 ZNF711Q9Y462 761 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 LRRC42Q9Y546 428 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 TENM1Q9UKZ4 2725 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 ABCA1O95477 2261 aa2.94□□□□□ -1.94
SPG11-225ENST00000561391 SPTBP11277 2137 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 A0A1B0GTH9 108 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 PABPN1LA6NDY0 278 aaKnown RBP2.93□□□□□ -1.94
SPG11-225ENST00000561391 LILRA5A6NI73 299 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 SLC9B1P1A6NJY1 282 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 SH2D7A6NKC9 451 aaPredicted RBP2.93□□□□□ -1.94
SPG11-225ENST00000561391 SAC3D1A6NKF1 404 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 CGB1A6NKQ9 187 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 BBIP1A8MTZ0 92 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 TMEM150CB9EJG8 249 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 E5RI56 91 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 GOLGA8TH3BQL2 631 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 ZNF195O14628 629 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 PRMT5O14744 637 aaPredicted RBP2.93□□□□□ -1.94
SPG11-225ENST00000561391 UBDO15205 165 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 ZNF749O43361 778 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 ITM2AO43736 263 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 KERAO60938 352 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 CRCPO75575 148 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 PDE9AO76083 593 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 SRP72O76094 671 aaKnown RBP2.93□□□□□ -1.94
SPG11-225ENST00000561391 PGLSO95336 258 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 PIGNO95427 931 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 CD160O95971 181 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 IGSF6O95976 241 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 GOT2P00505 430 aaKnown RBP2.93□□□□□ -1.94
SPG11-225ENST00000561391 NPPAP01160 153 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 HLA-DQA2P01906 255 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 COX4I1P13073 169 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 ACADSP16219 412 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 ITGA2P17301 1181 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 GM2AP17900 193 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 MSH3P20585 1137 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 RPS3P23396 243 aaKnown RBP eCLIP2.93□□□□□ -1.94
SPG11-225ENST00000561391 PTGER1P34995 402 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 VHLP40337 213 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 GTF2A1P52655 376 aaPredicted RBP2.93□□□□□ -1.94
SPG11-225ENST00000561391 ZNF140P52738 457 aaPredicted RBP2.93□□□□□ -1.94
SPG11-225ENST00000561391 PKNOX1P55347 436 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 ACTR3P61158 418 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 RHOAP61586 193 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 CDK3Q00526 305 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 RHAGQ02094 409 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 SLC34A1Q06495 639 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 BCL2L1Q07817 233 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 TRAP1Q12931 704 aaKnown RBP2.93□□□□□ -1.94
SPG11-225ENST00000561391 VEZF1Q14119 521 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 EFR3AQ14156 821 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 SQLEQ14534 574 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 NAA25Q14CX7 972 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 CYTH1Q15438 398 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 GSTA3Q16772 222 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 CLEC12BQ2HXU8 276 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 HYAL4Q2M3T9 481 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 SMU1Q2TAY7 513 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 TTLL9Q3SXZ7 439 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 COQ5Q5HYK3 327 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 C1orf146Q5VVC0 180 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 PRMT9Q6P2P2 845 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 CNSTQ6PJW8 725 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 SLC22A25Q6T423 547 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 HACD2Q6Y1H2 254 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 SHISA6Q6ZSJ9 500 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 GLT6D1Q7Z4J2 308 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 CMC1Q7Z7K0 106 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 ADGRG6Q86SQ4 1221 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 ADAMTSL2Q86TH1 951 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 ISCA2Q86U28 154 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 TRIM74Q86UV6 250 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 ANKRD13BQ86YJ7 626 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 GPSM1Q86YR5 675 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 GALNT13Q8IUC8 556 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 CENPLQ8N0S6 344 aaPredicted RBP2.93□□□□□ -1.94
SPG11-225ENST00000561391 TCAIMQ8N3R3 496 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 PGBD5Q8N414 524 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 LIX1Q8N485 282 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 KIF2BQ8N4N8 673 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 NANOGP1Q8N7R0 232 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 PCYOX1LQ8NBM8 494 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 OR4K2Q8NGD2 314 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 OR2AP1Q8NGE2 309 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 OR13J1Q8NGT2 312 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 OR8K5Q8NH50 307 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 KCTD4Q8WVF5 259 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 PSMF1Q92530 271 aa2.93□□□□□ -1.94
SPG11-225ENST00000561391 EME1Q96AY2 570 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms