RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 AGKQ53H12 422 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 KLHL26Q53HC5 615 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 COX20Q5RI15 118 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 PDZK1Q5T2W1 519 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 CCDC71Q8IV32 467 aaPredicted RBP18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 ZFP90Q8TF47 636 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 CA5BP1Q8WTZ4 195 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 STON2Q8WXE9 905 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 ROPN1LQ96C74 230 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 AURKBQ96GD4 344 aaPredicted RBP18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 TRIM33Q9UPN9 1127 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 RNF6Q9Y252 685 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 WDR45Q9Y484 360 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 PHF3Q92576 2039 aaKnown RBP18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 CENPVL1A0A0U1RR11 272 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 AHRRA9YTQ3 701 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 SHISA8B8ZZ34 492 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 NPIPB9F8W1W9 429 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 H0Y3Z8 333 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 KRT75O95678 551 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 HOXD4P09016 255 aaPredicted RBP18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 TROVE2P10155 538 aaKnown RBP eCLIP18.04■□□□□ 0.482e-6■□□□□ 9.2
TSPAN3-210ENST00000561277 AGAP20933 346 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 PTGER4P35408 488 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 ANXA11P50995 505 aaKnown RBP18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 B3GALT5-AS1P59052 145 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 HPCAP84074 193 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 ZNF117Q03924 483 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 NDUFAF6Q330K2 333 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 BLOC1S3Q6QNY0 202 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 B4GALNT2Q8NHY0 566 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 GTF2H4Q92759 462 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 SPDL1Q96EA4 605 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 TRIB1Q96RU8 372 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 KLHDC3Q9BQ90 382 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 TMEM120AQ9BXJ8 343 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 HHATLQ9HCP6 504 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 DTNAQ9Y4J8 743 aa18.04■□□□□ 0.48
TSPAN3-210ENST00000561277 PCNX3Q9H6A9 2034 aa18.03■□□□□ 0.48
TSPAN3-210ENST00000561277 OR2M5A3KFT3 312 aa18.03■□□□□ 0.48
TSPAN3-210ENST00000561277 OIP5O43482 229 aa18.03■□□□□ 0.48
TSPAN3-210ENST00000561277 CLDN14O95500 239 aa18.03■□□□□ 0.48
TSPAN3-210ENST00000561277 ZCCHC18P0CG32 403 aa18.03■□□□□ 0.48
TSPAN3-210ENST00000561277 CPN1P15169 458 aa18.03■□□□□ 0.48
TSPAN3-210ENST00000561277 CD1EP15812 388 aa18.03■□□□□ 0.48
TSPAN3-210ENST00000561277 POU3F2P20265 443 aaPredicted RBP18.03■□□□□ 0.48
TSPAN3-210ENST00000561277 CAPN3P20807 821 aa18.03■□□□□ 0.48
TSPAN3-210ENST00000561277 CHMP24386 653 aa18.03■□□□□ 0.48
TSPAN3-210ENST00000561277 LHX2P50458 406 aa18.03■□□□□ 0.48
TSPAN3-210ENST00000561277 ZNF41P51814 821 aaPredicted RBP18.03■□□□□ 0.48
TSPAN3-210ENST00000561277 ART3Q13508 389 aa18.03■□□□□ 0.48
TSPAN3-210ENST00000561277 ZNF630Q2M218 657 aaPredicted RBP18.03■□□□□ 0.48
TSPAN3-210ENST00000561277 MTERF4Q7Z6M4 381 aaKnown RBP18.03■□□□□ 0.48
TSPAN3-210ENST00000561277 UBQLNLQ8IYU4 475 aa18.03■□□□□ 0.48
TSPAN3-210ENST00000561277 PIGQQ9BRB3 760 aa18.03■□□□□ 0.48
TSPAN3-210ENST00000561277 NMUR2Q9GZQ4 415 aa18.03■□□□□ 0.48
TSPAN3-210ENST00000561277 TPT1P8Q9HAU6 139 aa18.03■□□□□ 0.48
TSPAN3-210ENST00000561277 KCNE5Q9UJ90 142 aa18.03■□□□□ 0.48
TSPAN3-210ENST00000561277 CARD8Q9Y2G2 431 aa18.03■□□□□ 0.48
TSPAN3-210ENST00000561277 PRAMEF27A3QJZ7 478 aa18.02■□□□□ 0.48
TSPAN3-210ENST00000561277 H3BML4 177 aa18.02■□□□□ 0.48
TSPAN3-210ENST00000561277 GTPBP1O00178 669 aaKnown RBP18.02■□□□□ 0.48
TSPAN3-210ENST00000561277 KIAA0513O60268 411 aa18.02■□□□□ 0.48
TSPAN3-210ENST00000561277 UGT2B17O75795 530 aa18.02■□□□□ 0.48
TSPAN3-210ENST00000561277 MSX1P28360 303 aa18.02■□□□□ 0.48
TSPAN3-210ENST00000561277 CHRNB4P30926 498 aa18.02■□□□□ 0.48
TSPAN3-210ENST00000561277 ADH7P40394 386 aa18.02■□□□□ 0.48
TSPAN3-210ENST00000561277 CRATP43155 626 aa18.02■□□□□ 0.48
TSPAN3-210ENST00000561277 IRX1P78414 480 aaPredicted RBP18.02■□□□□ 0.48
TSPAN3-210ENST00000561277 SYPL1Q16563 259 aa18.02■□□□□ 0.48
TSPAN3-210ENST00000561277 TYW3Q6IPR3 259 aaKnown RBP18.02■□□□□ 0.48
TSPAN3-210ENST00000561277 CGB2Q6NT52 195 aa18.02■□□□□ 0.48
TSPAN3-210ENST00000561277 CBLN3Q6UW01 205 aa18.02■□□□□ 0.48
TSPAN3-210ENST00000561277 HMGN2P46Q86SG4 172 aa18.02■□□□□ 0.48
TSPAN3-210ENST00000561277 TMCO5AQ8N6Q1 288 aa18.02■□□□□ 0.48
TSPAN3-210ENST00000561277 ANKFN1Q8N957 763 aa18.02■□□□□ 0.48
TSPAN3-210ENST00000561277 SMPDL3BQ92485 455 aa18.02■□□□□ 0.48
TSPAN3-210ENST00000561277 PAIP1Q9H074 479 aaKnown RBP18.02■□□□□ 0.48
TSPAN3-210ENST00000561277 RABEP2Q9H5N1 569 aa18.02■□□□□ 0.48
TSPAN3-210ENST00000561277 A0A0G2JNJ9 132 aa18.01■□□□□ 0.47
TSPAN3-210ENST00000561277 FAM90A27PA6NNH2 459 aa18.01■□□□□ 0.47
TSPAN3-210ENST00000561277 FAM47E-STBD1D6RA91 191 aa18.01■□□□□ 0.47
TSPAN3-210ENST00000561277 H6PDO95479 791 aa18.01■□□□□ 0.47
TSPAN3-210ENST00000561277 NUDT14O95848 222 aa18.01■□□□□ 0.47
TSPAN3-210ENST00000561277 UBL4AP11441 157 aa18.01■□□□□ 0.47
TSPAN3-210ENST00000561277 ETFAP13804 333 aa18.01■□□□□ 0.47
TSPAN3-210ENST00000561277 HTR1EP28566 365 aa18.01■□□□□ 0.47
TSPAN3-210ENST00000561277 GRNP28799 593 aaKnown RBP18.01■□□□□ 0.47
TSPAN3-210ENST00000561277 FRRS1Q6ZNA5 592 aa18.01■□□□□ 0.47
TSPAN3-210ENST00000561277 SEM1Q6ZVN7 128 aa18.01■□□□□ 0.47
TSPAN3-210ENST00000561277 NPAS1Q99742 590 aa18.01■□□□□ 0.47
TSPAN3-210ENST00000561277 TUBA1CQ9BQE3 449 aa18.01■□□□□ 0.47
TSPAN3-210ENST00000561277 ZNF385DQ9H6B1 395 aa18.01■□□□□ 0.47
TSPAN3-210ENST00000561277 CCDC134Q9H6E4 229 aa18.01■□□□□ 0.47
TSPAN3-210ENST00000561277 POLE3Q9NRF9 147 aa18.01■□□□□ 0.47
TSPAN3-210ENST00000561277 MED17Q9NVC6 651 aa18.01■□□□□ 0.47
TSPAN3-210ENST00000561277 Q9UFV3 132 aa18.01■□□□□ 0.47
TSPAN3-210ENST00000561277 ZNF337Q9Y3M9 751 aa18.01■□□□□ 0.47
TSPAN3-210ENST00000561277 PCDHB14Q9Y5E9 798 aa18.01■□□□□ 0.47
TSPAN3-210ENST00000561277 SERINC4A6NH21 518 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms