RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 AIF1LQ9BQI0 150 aa13.05□□□□□ -0.32
RABGGTA-220ENST00000560998 ARHGAP9Q9BRR9 750 aa13.05□□□□□ -0.32
RABGGTA-220ENST00000560998 OSGEPL1Q9H4B0 414 aa13.05□□□□□ -0.32
RABGGTA-220ENST00000560998 IGFLR1Q9H665 355 aa13.05□□□□□ -0.32
RABGGTA-220ENST00000560998 SEMA3GQ9NS98 782 aa13.05□□□□□ -0.32
RABGGTA-220ENST00000560998 AHSPQ9NZD4 102 aa13.05□□□□□ -0.32
RABGGTA-220ENST00000560998 ZNF624Q9P2J8 865 aaPredicted RBP13.05□□□□□ -0.32
RABGGTA-220ENST00000560998 CPNE7Q9UBL6 633 aa13.05□□□□□ -0.32
RABGGTA-220ENST00000560998 ING1Q9UK53 422 aaPredicted RBP13.05□□□□□ -0.32
RABGGTA-220ENST00000560998 ANGPT4Q9Y264 503 aa13.05□□□□□ -0.32
RABGGTA-220ENST00000560998 PLXND1Q9Y4D7 1925 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 A0A1W2PRB8 838 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 ANKDD1BA6NHY2 528 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 F8W036 122 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 PLPP1O14494 284 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 CHST10O43529 356 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 PRAF2O60831 178 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 ITGA10O75578 1167 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 ADH1BP00325 375 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 APOC1P02654 83 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 H2AFB2P0C5Z0 115 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 SLC35G4P0C7Q5 338 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 ACP2P11117 423 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 C5AR1P21730 350 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 TEAD1P28347 426 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 PBX2P40425 430 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 REEP5Q00765 189 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 EEF1A2Q05639 463 aaKnown RBP13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 ACSM1Q08AH1 577 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 COL19A1Q14993 1142 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 SYT14P1Q58G82 188 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 KHDRBS2Q5VWX1 349 aaKnown RBP13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 TRIM40Q6P9F5 258 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 SEZ6L2Q6UXD5 910 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 BTN2A1Q7KYR7 527 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 MARCH9Q86YJ5 346 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 NAXDQ8IW45 347 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 SCARB1Q8WTV0 552 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 SMPDL3AQ92484 453 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 SFXN2Q96NB2 322 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 C12orf57Q99622 126 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 MS4A8Q9BY19 250 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 SLC6A16Q9GZN6 736 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 RNF32Q9H0A6 362 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 PCBD2Q9H0N5 130 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 LMAN2LQ9H0V9 348 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 FN3KQ9H479 309 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 RERGLQ9H628 205 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 C1GALT1Q9NS00 363 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 IMP3Q9NV31 184 aaKnown RBP13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 TAAR2Q9P1P5 351 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 PPIEQ9UNP9 301 aaKnown RBP13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 OR1A2Q9Y585 309 aa13.04□□□□□ -0.32
RABGGTA-220ENST00000560998 A0A1B0GW55 424 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 A0A1W2PP55 124 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 A0A1W2PPV9 198 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 TRBC2A0A5B9 178 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 PQLC2LA1A4F0 135 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 GPR89AB7ZAQ6 455 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 G3V3Q6 166 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 H3BN98 237 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 DNASE2O00115 360 aaPredicted RBP13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 CACNB4O00305 520 aaPredicted RBP13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 SSNA1O43805 119 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 GPR89BP0CG08 455 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 DUX4L2P0CJ85 424 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 DUX4L3P0CJ86 424 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 DUX4L4P0CJ87 422 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 DUX4L5P0CJ88 424 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 DUX4L6P0CJ89 424 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 DUX4L7P0CJ90 424 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 DRD2P14416 443 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 PSMB5P28074 263 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 CHI3L1P36222 383 aaPredicted RBP13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 TRIM23P36406 574 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 MTNR1BP49286 362 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 CCR8P51685 355 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 PCBP3P57721 371 aaKnown RBP13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 VSX2P58304 361 aaPredicted RBP13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 TSPAN5P62079 268 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 FGL2Q14314 439 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 GANABQ14697 944 aaKnown RBP13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 SEC23BQ15437 767 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 NDUFA9Q16795 377 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 SLC5A12Q1EHB4 618 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 HBMQ6B0K9 141 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 OAFQ86UD1 273 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 OR56B4Q8NH76 319 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 OR5AK3PQ8NH89 298 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 NFKBIDQ8NI38 313 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 LCORQ96JN0 433 aaPredicted RBP13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 ZNF582Q96NG8 517 aaPredicted RBP13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 F2RL3Q96RI0 385 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 CDCA3Q99618 268 aaPredicted RBP13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 TMPRSS13Q9BYE2 586 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 SLC19A3Q9BZV2 496 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 MS4A7Q9GZW8 240 aaPredicted RBP13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 WDR26Q9H7D7 661 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 MIEF1Q9NQG6 463 aa13.03□□□□□ -0.32
RABGGTA-220ENST00000560998 DUX4Q9UBX2 424 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms