RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 OR4A15Q8NGL6 344 aa13.72□□□□□ -0.21
SNRPA1-210ENST00000560383 OR5AK3PQ8NH89 298 aa13.72□□□□□ -0.21
SNRPA1-210ENST00000560383 LRRC46Q96FV0 321 aa13.72□□□□□ -0.21
SNRPA1-210ENST00000560383 OR7D2Q96RA2 312 aa13.72□□□□□ -0.21
SNRPA1-210ENST00000560383 TUBA1CQ9BQE3 449 aa13.72□□□□□ -0.21
SNRPA1-210ENST00000560383 HOXD1Q9GZZ0 328 aa13.72□□□□□ -0.21
SNRPA1-210ENST00000560383 ZNF629Q9UEG4 869 aaPredicted RBP13.72□□□□□ -0.21
SNRPA1-210ENST00000560383 FOXD3Q9UJU5 478 aaPredicted RBP13.72□□□□□ -0.21
SNRPA1-210ENST00000560383 RPH3AQ9Y2J0 694 aaPredicted RBP13.72□□□□□ -0.21
SNRPA1-210ENST00000560383 MED13LQ71F56 2210 aa13.72□□□□□ -0.21
SNRPA1-210ENST00000560383 MED12Q93074 2177 aa13.71□□□□□ -0.21
SNRPA1-210ENST00000560383 RNF103-CHMP3A0A140T963 221 aa13.71□□□□□ -0.21
SNRPA1-210ENST00000560383 SYT5O00445 386 aa13.71□□□□□ -0.21
SNRPA1-210ENST00000560383 AK1P00568 194 aa13.71□□□□□ -0.21
SNRPA1-210ENST00000560383 GUSBP08236 651 aa13.71□□□□□ -0.21
SNRPA1-210ENST00000560383 PEPDP12955 493 aa13.71□□□□□ -0.21
SNRPA1-210ENST00000560383 IDO1P14902 403 aa13.71□□□□□ -0.21
SNRPA1-210ENST00000560383 HK1P19367 917 aa13.71□□□□□ -0.21
SNRPA1-210ENST00000560383 MATN1P21941 496 aa13.71□□□□□ -0.21
SNRPA1-210ENST00000560383 UQCRC2P22695 453 aa13.71□□□□□ -0.21
SNRPA1-210ENST00000560383 SOAT1P35610 550 aa13.71□□□□□ -0.21
SNRPA1-210ENST00000560383 LRRC74AQ0VAA2 488 aa13.71□□□□□ -0.21
SNRPA1-210ENST00000560383 PDCD4Q53EL6 469 aaKnown RBP13.71□□□□□ -0.21
SNRPA1-210ENST00000560383 KLHL26Q53HC5 615 aa13.71□□□□□ -0.21
SNRPA1-210ENST00000560383 MTERF4Q7Z6M4 381 aaKnown RBP13.71□□□□□ -0.21
SNRPA1-210ENST00000560383 ANKRD46Q86W74 232 aa13.71□□□□□ -0.21
SNRPA1-210ENST00000560383 OR5D16Q8NGK9 328 aa13.71□□□□□ -0.21
SNRPA1-210ENST00000560383 CHMP6Q96FZ7 201 aa13.71□□□□□ -0.21
SNRPA1-210ENST00000560383 OR52B2Q96RD2 323 aa13.71□□□□□ -0.21
SNRPA1-210ENST00000560383 TRIB1Q96RU8 372 aa13.71□□□□□ -0.21
SNRPA1-210ENST00000560383 SDF2Q99470 211 aa13.71□□□□□ -0.21
SNRPA1-210ENST00000560383 SDR39U1Q9NRG7 319 aaPredicted RBP13.71□□□□□ -0.21
SNRPA1-210ENST00000560383 CLCF1Q9UBD9 225 aa13.71□□□□□ -0.21
SNRPA1-210ENST00000560383 C2CD3Q4AC94 2353 aa13.71□□□□□ -0.22
SNRPA1-210ENST00000560383 ZFHX3Q15911 3703 aa13.71□□□□□ -0.22
SNRPA1-210ENST00000560383 DOCK7Q96N67 2140 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 A0A087WZY1 265 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 OR2M5A3KFT3 312 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 C7orf72A4D263 438 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 H0Y3Z8 333 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 SCDO00767 359 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 HCRTR2O43614 444 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 CTAG2O75638 210 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 TGDSO95455 350 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 IL2RAP01589 272 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 PGRP06401 933 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 HPGDP15428 266 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 ATP6V1C1P21283 382 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 ZNF136P52737 540 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 ATP12AP54707 1039 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 CLDN15P56746 228 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 RPS26P62854 115 aaKnown RBP13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 CD226Q15762 336 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 GSTA3Q16772 222 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 RAET1LQ5VY80 246 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 SAXO2Q658L1 398 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 HEPHL1Q6MZM0 1159 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 EPGNQ6UW88 154 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 CLEC4FQ8N1N0 589 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 LRRC8CQ8TDW0 803 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 NINJ1Q92982 152 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 RNASE6Q93091 150 aaKnown RBP13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 WNT2BQ93097 391 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 NEURL3Q96EH8 262 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 SLC35G5Q96KT7 338 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 ZFP3Q96NJ6 502 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 PIGQQ9BRB3 760 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 ZIM2Q9NZV7 527 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 ZNF337Q9Y3M9 751 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 USH1CQ9Y6N9 552 aa13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 ZNF469Q96JG9 3925 aaPredicted RBP13.7□□□□□ -0.22
SNRPA1-210ENST00000560383 NUP214P35658 2090 aaPredicted RBP13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 FAM221AA4D161 298 aa13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 CLCA1A8K7I4 914 aa13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 RCBTB2O95199 551 aa13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 CPSF4O95639 269 aaKnown RBP13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 AGR2O95994 175 aa13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 IL18BPO95998 194 aa13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 ZNF17P17021 662 aa13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 BMP5P22003 454 aa13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 PSMA4P25789 261 aaKnown RBP13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 DNAJA1P31689 397 aaKnown RBP13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 KIR2DL3P43628 341 aa13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 MRPL19P49406 292 aaKnown RBP13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 DGKQP52824 942 aa13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 NME5P56597 212 aa13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 SRYQ05066 204 aa13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 ARHGAP11BQ3KRB8 267 aa13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 FLYWCH1Q4VC44 716 aa13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 NXNQ6DKJ4 435 aa13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 GTPBP8Q8N3Z3 284 aaPredicted RBP13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 GOLGA6L1Q8N7Z2 621 aa13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 C9orf106Q8NAJ2 232 aa13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 ZNF527Q8NB42 609 aa13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 OIT3Q8WWZ8 545 aa13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 OR52E6Q96RD3 313 aa13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 ZBTB18Q99592 522 aa13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 TM9SF2Q99805 663 aa13.69□□□□□ -0.22
SNRPA1-210ENST00000560383 NMUR2Q9GZQ4 415 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms