RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 EXOSC7Q15024 291 aaKnown RBP12.67□□□□□ -0.38
TRAF3-208ENST00000560371 GRAMD2AQ8IUY3 354 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 ZNF595Q8IYB9 648 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 C19orf47Q8N9M1 422 aaKnown RBP12.67□□□□□ -0.38
TRAF3-208ENST00000560371 C12orf43Q96C57 262 aaKnown RBP12.67□□□□□ -0.38
TRAF3-208ENST00000560371 NGBQ9NPG2 151 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 MARCH5Q9NX47 278 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 C1SP09871 688 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 SDC1P18827 310 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 IVDP26440 423 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 PSMB5P28074 263 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 SOX3P41225 446 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 DEFA5Q01523 94 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 MZT1Q08AG7 82 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 ADIPOR2Q86V24 386 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 MMP21Q8N119 569 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 FER1L6-AS2Q96M78 137 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 MMP27Q9H306 513 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 NHSQ6T4R5 1651 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 FAM171A2A8MVW0 826 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 YY2O15391 372 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 GNAO1P09471 354 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 HSD17B1P14061 328 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 ATF4P18848 351 aaPredicted RBP12.67□□□□□ -0.38
TRAF3-208ENST00000560371 FAPQ12884 760 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 C3orf38Q5JPI3 329 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 ANKK1Q8NFD2 765 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 OR5J2Q8NH18 312 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 OR5AK2Q8NH90 309 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 CDS1Q92903 461 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 SLC39A13Q96H72 371 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 KLHL15Q96M94 604 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 HINT2Q9BX68 163 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 TREX1Q9NSU2 369 aa12.67□□□□□ -0.38
TRAF3-208ENST00000560371 SOCS7O14512 581 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 CASC3O15234 703 aaKnown RBP12.66□□□□□ -0.38
TRAF3-208ENST00000560371 SNNO75324 88 aaPredicted RBP12.66□□□□□ -0.38
TRAF3-208ENST00000560371 OSMP13725 252 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 AIMP2Q13155 320 aaKnown RBP12.66□□□□□ -0.38
TRAF3-208ENST00000560371 DCST2Q5T1A1 773 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 WDR53Q7Z5U6 358 aaPredicted RBP12.66□□□□□ -0.38
TRAF3-208ENST00000560371 OR5L1Q8NGL2 311 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 TMEM239Q8WW34 195 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 DOCK5Q9H7D0 1870 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 PSPHP78330 225 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 BDH1Q02338 343 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 RBM39Q14498 530 aaKnown RBP12.66□□□□□ -0.38
TRAF3-208ENST00000560371 LRRC37A5PQ49AS3 106 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 PIGGQ5H8A4 983 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 TMEM240Q5SV17 173 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 LCN8Q6JVE9 175 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 PAQR9Q6ZVX9 377 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 SLC22A16Q86VW1 577 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 ZBTB8BQ8NAP8 495 aaPredicted RBP12.66□□□□□ -0.38
TRAF3-208ENST00000560371 CYB561A3Q8NBI2 242 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 CREB3L1Q96BA8 519 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 UTP23Q9BRU9 249 aaKnown RBP12.66□□□□□ -0.38
TRAF3-208ENST00000560371 LMF2Q9BU23 707 aaKnown RBP12.66□□□□□ -0.38
TRAF3-208ENST00000560371 CNIH4Q9P003 139 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 PADI1Q9ULC6 663 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 LOC102725191A0A1B0GVB3 256 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 EGFP01133 1207 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 RACK1P63244 317 aaKnown RBP12.66□□□□□ -0.38
TRAF3-208ENST00000560371 RAB11BQ15907 218 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 ANKRD33Q7Z3H0 272 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 ZFP41Q8N8Y5 198 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 OR13J1Q8NGT2 312 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 NETO1Q8TDF5 533 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 CHRDQ9H2X0 955 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 ABRACLQ9P1F3 81 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 PIKFYVEQ9Y2I7 2098 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 CENPBD1B2RD01 187 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 CSF2P04141 144 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 DCNP07585 359 aaKnown RBP12.66□□□□□ -0.38
TRAF3-208ENST00000560371 RETP07949 1114 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 RRNAD1Q96FB5 475 aaKnown RBP12.66□□□□□ -0.38
TRAF3-208ENST00000560371 PTGER1P34995 402 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 MAP2K4P45985 399 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 ZNF45Q02386 682 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 ZNF420Q8TAQ5 688 aaPredicted RBP12.66□□□□□ -0.38
TRAF3-208ENST00000560371 SLC6A18Q96N87 628 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 HDAC8Q9BY41 377 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 KCND3Q9UK17 655 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 YES1P07947 543 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 HSD17B7P56937 341 aa12.66□□□□□ -0.38
TRAF3-208ENST00000560371 TMEM265A0A087WTH1 108 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 MEGF11A6BM72 1044 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 GABRR3A8MPY1 467 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 ATXN7L3Q14CW9 347 aaPredicted RBP12.65□□□□□ -0.38
TRAF3-208ENST00000560371 Q8N402 240 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 IQCF1Q8N6M8 205 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 KDM1BQ8NB78 822 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 FAM71F1Q96KD3 344 aaPredicted RBP12.65□□□□□ -0.38
TRAF3-208ENST00000560371 DCAF7P61962 342 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 ZP2Q05996 745 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 METTL25Q8N6Q8 603 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 OR4K3Q96R72 315 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 PHF7Q9BWX1 381 aaPredicted RBP12.65□□□□□ -0.38
TRAF3-208ENST00000560371 NPIPA5A0A0B4J1W7 369 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 NPIPA7E9PJI5 369 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms