RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 GLYATQ6IB77 296 aa13.12□□□□□ -0.31
SMAD6-204ENST00000559931 APOOLQ6UXV4 268 aa13.12□□□□□ -0.31
SMAD6-204ENST00000559931 EIF3MQ7L2H7 374 aaKnown RBP13.12□□□□□ -0.31
SMAD6-204ENST00000559931 VRK2Q86Y07 508 aa13.12□□□□□ -0.31
SMAD6-204ENST00000559931 PTRH1Q86Y79 214 aaKnown RBP13.12□□□□□ -0.31
SMAD6-204ENST00000559931 OR2M7Q8NG81 312 aa13.12□□□□□ -0.31
SMAD6-204ENST00000559931 SCMH1Q96GD3 660 aa13.12□□□□□ -0.31
SMAD6-204ENST00000559931 BBC3Q96PG8 261 aaPredicted RBP13.12□□□□□ -0.31
SMAD6-204ENST00000559931 CADM1Q9BY67 442 aaKnown RBP13.12□□□□□ -0.31
SMAD6-204ENST00000559931 LRMDAQ9H2I8 198 aa13.12□□□□□ -0.31
SMAD6-204ENST00000559931 HHATLQ9HCP6 504 aa13.12□□□□□ -0.31
SMAD6-204ENST00000559931 KCNE5Q9UJ90 142 aa13.12□□□□□ -0.31
SMAD6-204ENST00000559931 BOKQ9UMX3 212 aaPredicted RBP13.12□□□□□ -0.31
SMAD6-204ENST00000559931 GPC6Q9Y625 555 aaPredicted RBP13.12□□□□□ -0.31
SMAD6-204ENST00000559931 BOD1L1Q8NFC6 3051 aa13.12□□□□□ -0.31
SMAD6-204ENST00000559931 A0A0G2JMM0 328 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 CENPVL1A0A0U1RR11 272 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 A0A1W2PPB8 328 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 A0A1W2PQD3 144 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 A0A1W2PRS3 328 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 KIR3DP1A8MWS1 328 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 ATXN7O15265 892 aaPredicted RBP13.11□□□□□ -0.31
SMAD6-204ENST00000559931 HCRTR2O43614 444 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 OPN1SWP03999 348 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 PABPC4LP0CB38 370 aaKnown RBP13.11□□□□□ -0.31
SMAD6-204ENST00000559931 GGT1P19440 569 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 KDELR2P33947 212 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 KCNJ10P78508 379 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 BNIP2Q12982 314 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 TOMM20Q15388 145 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 LIN52Q52LA3 116 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 AP1ARQ63HQ0 302 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 SLC6A19Q695T7 634 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 TMEM81Q6P7N7 255 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 CCDC80Q76M96 950 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 MISPQ8IVT2 679 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 TMCO5AQ8N6Q1 288 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 SMYD1Q8NB12 490 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 OR1J4Q8NGS1 313 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 OIT3Q8WWZ8 545 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 PNPLA2Q96AD5 504 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 CCDC124Q96CT7 223 aaKnown RBP13.11□□□□□ -0.31
SMAD6-204ENST00000559931 WBP1Q96G27 269 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 SH3YL1Q96HL8 342 aaPredicted RBP13.11□□□□□ -0.31
SMAD6-204ENST00000559931 ZNF597Q96LX8 424 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 PCDHAC1Q9H158 963 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 PROK2Q9HC23 129 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 DEPPQ9NTK1 212 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 TUBA8Q9NY65 449 aaPredicted RBP13.11□□□□□ -0.31
SMAD6-204ENST00000559931 ZNF443Q9Y2A4 671 aaPredicted RBP13.11□□□□□ -0.31
SMAD6-204ENST00000559931 PCDHGB6Q9Y5F9 930 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 WIF1Q9Y5W5 379 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 DSPPQ9NZW4 1301 aa13.11□□□□□ -0.31
SMAD6-204ENST00000559931 PCNX3Q9H6A9 2034 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 SPTA1P02549 2419 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 ERICH4A6NGS2 130 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 CLDN24A6NM45 220 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 ZNF264O43296 627 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 GCM2O75603 506 aaPredicted RBP13.1□□□□□ -0.31
SMAD6-204ENST00000559931 SORBS2O94875 1100 aaKnown RBP13.1□□□□□ -0.31
SMAD6-204ENST00000559931 MFN2O95140 757 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 RASAL1O95294 804 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 ZNF682O95780 498 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 NUDT14O95848 222 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 THBS1P07996 1170 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 UBTFL6P0CB48 400 aaPredicted RBP13.1□□□□□ -0.31
SMAD6-204ENST00000559931 UBL4AP11441 157 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 NID1P14543 1247 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 RFC3P40938 356 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 PTGDSP41222 190 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 CCR4P51679 360 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 PCBP3P57721 371 aaKnown RBP13.1□□□□□ -0.31
SMAD6-204ENST00000559931 KLRB1Q12918 225 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 TRIM25Q14258 630 aaKnown RBP13.1□□□□□ -0.31
SMAD6-204ENST00000559931 FGFBP1Q14512 234 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 INPP5JQ15735 1006 aaPredicted RBP13.1□□□□□ -0.31
SMAD6-204ENST00000559931 NDUFAF6Q330K2 333 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 COLEC12Q5KU26 742 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 ZNF836Q6ZNA1 936 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 ULK2Q8IYT8 1036 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 BHLHE22Q8NFJ8 381 aaPredicted RBP13.1□□□□□ -0.31
SMAD6-204ENST00000559931 OR4K17Q8NGC6 315 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 RASSF5Q8WWW0 418 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 LZICQ8WZA0 190 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 SLC39A7Q92504 469 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 TPD52L3Q96J77 140 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 RTN4RQ9BZR6 473 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 MMADHCQ9H3L0 296 aaPredicted RBP13.1□□□□□ -0.31
SMAD6-204ENST00000559931 DSN1Q9H410 356 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 RLIMQ9NVW2 624 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 ADPRHL2Q9NX46 363 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 KLHL28Q9NXS3 571 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 MED11Q9P086 117 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 MAGEL2Q9UJ55 1249 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 SLC35A3Q9Y2D2 325 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 CARD8Q9Y2G2 431 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 SNX13Q9Y5W8 968 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 COL6A6A6NMZ7 2263 aa13.1□□□□□ -0.31
SMAD6-204ENST00000559931 PINLYPA6NC86 204 aa13.09□□□□□ -0.31
SMAD6-204ENST00000559931 SUV39H1O43463 412 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms