RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 ZNHIT3Q15649 155 aaPredicted RBP16.48■□□□□ 0.23
SNX1-208ENST00000559844 DECR1Q16698 335 aa16.48■□□□□ 0.23
SNX1-208ENST00000559844 CCNJQ5T5M9 372 aa16.48■□□□□ 0.23
SNX1-208ENST00000559844 AP1ARQ63HQ0 302 aa16.48■□□□□ 0.23
SNX1-208ENST00000559844 SHISA5Q8N114 240 aa16.48■□□□□ 0.23
SNX1-208ENST00000559844 OR8J1Q8NGP2 316 aa16.48■□□□□ 0.23
SNX1-208ENST00000559844 DOK4Q8TEW6 326 aa16.48■□□□□ 0.23
SNX1-208ENST00000559844 PIK3R3Q92569 461 aa16.48■□□□□ 0.23
SNX1-208ENST00000559844 RBM18Q96H35 190 aaKnown RBP16.48■□□□□ 0.23
SNX1-208ENST00000559844 PEX11GQ96HA9 241 aa16.48■□□□□ 0.23
SNX1-208ENST00000559844 CRELD1Q96HD1 420 aa16.48■□□□□ 0.23
SNX1-208ENST00000559844 LMF2Q9BU23 707 aaKnown RBP16.48■□□□□ 0.23
SNX1-208ENST00000559844 ITPAQ9BY32 194 aa16.48■□□□□ 0.23
SNX1-208ENST00000559844 GPR83Q9NYM4 423 aa16.48■□□□□ 0.23
SNX1-208ENST00000559844 CCDC187A0A096LP49 1063 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 FITM1A5D6W6 292 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 H0YIG0 161 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 CBX7O95931 251 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 TNNI3P19429 210 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 GABRA3P34903 492 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 TRHRP34981 398 aaPredicted RBP16.47■□□□□ 0.23
SNX1-208ENST00000559844 TSPAN31Q12999 210 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 GRM7Q14831 915 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 P2RY8Q86VZ1 359 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 CACTIN-AS1Q8N1I8 211 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 BMPERQ8N8U9 685 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 PIGXQ8TBF5 258 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 ACOT11Q8WXI4 607 aaPredicted RBP16.47■□□□□ 0.23
SNX1-208ENST00000559844 RIT1Q92963 219 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 ZNF501Q96CX3 271 aaPredicted RBP16.47■□□□□ 0.23
SNX1-208ENST00000559844 SLC41A3Q96GZ6 507 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 AMBNQ9NP70 447 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 KRCC1Q9NPI7 259 aaPredicted RBP16.47■□□□□ 0.23
SNX1-208ENST00000559844 PMS2P1A4D2B8 440 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 M0R129 80 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 SLC22A1O15245 554 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 BRINP1O60477 761 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 BCAS1O75363 584 aaPredicted RBP16.47■□□□□ 0.23
SNX1-208ENST00000559844 NID1P14543 1247 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 ST3GAL4Q11206 333 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 BIKQ13323 160 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 EIF3IQ13347 325 aaKnown RBP16.47■□□□□ 0.23
SNX1-208ENST00000559844 COL9A2Q14055 689 aaPredicted RBP16.47■□□□□ 0.23
SNX1-208ENST00000559844 C3orf38Q5JPI3 329 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 TMPRSS7Q7RTY8 843 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 B3GNT7Q8NFL0 401 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 OR1L3Q8NH93 324 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 ZNF578Q96N58 590 aaPredicted RBP16.47■□□□□ 0.23
SNX1-208ENST00000559844 DGAT2Q96PD7 388 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 PELOQ9BRX2 385 aaKnown RBP16.47■□□□□ 0.23
SNX1-208ENST00000559844 RBCK1Q9BYM8 510 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 SLC25A19Q9HC21 320 aa16.47■□□□□ 0.23
SNX1-208ENST00000559844 MAN1A2O60476 641 aa16.46■□□□□ 0.23
SNX1-208ENST00000559844 OR2B3O76000 313 aa16.46■□□□□ 0.23
SNX1-208ENST00000559844 JMJD7P0C870 316 aa16.46■□□□□ 0.23
SNX1-208ENST00000559844 C21orf33P30042 268 aaPredicted RBP16.46■□□□□ 0.23
SNX1-208ENST00000559844 SMSP52788 366 aa16.46■□□□□ 0.23
SNX1-208ENST00000559844 HSD17B7P56937 341 aa16.46■□□□□ 0.23
SNX1-208ENST00000559844 CTF1Q16619 201 aa16.46■□□□□ 0.23
SNX1-208ENST00000559844 OCLNQ16625 522 aa16.46■□□□□ 0.23
SNX1-208ENST00000559844 DGAT2L6Q6ZPD8 337 aa16.46■□□□□ 0.23
SNX1-208ENST00000559844 TEX47Q8TBZ9 253 aa16.46■□□□□ 0.23
SNX1-208ENST00000559844 MMABQ96EY8 250 aaPredicted RBP16.46■□□□□ 0.23
SNX1-208ENST00000559844 CTRCQ99895 268 aa16.46■□□□□ 0.23
SNX1-208ENST00000559844 PRR14Q9BWN1 585 aa16.46■□□□□ 0.23
SNX1-208ENST00000559844 POLDIP3Q9BY77 421 aaKnown RBP16.46■□□□□ 0.23
SNX1-208ENST00000559844 ALOXE3Q9BYJ1 711 aa16.46■□□□□ 0.23
SNX1-208ENST00000559844 SPRTNQ9H040 489 aaPredicted RBP16.46■□□□□ 0.23
SNX1-208ENST00000559844 FOLH1BQ9HBA9 442 aa16.46■□□□□ 0.23
SNX1-208ENST00000559844 APMAPQ9HDC9 416 aa16.46■□□□□ 0.23
SNX1-208ENST00000559844 NECTIN3Q9NQS3 549 aa16.46■□□□□ 0.23
SNX1-208ENST00000559844 PISDQ9UG56 409 aa16.46■□□□□ 0.23
SNX1-208ENST00000559844 SERTAD3Q9UJW9 196 aa16.46■□□□□ 0.23
SNX1-208ENST00000559844 RARRES3Q9UL19 164 aa16.46■□□□□ 0.23
SNX1-208ENST00000559844 A0A1W2PNU3 283 aaPredicted RBP16.46■□□□□ 0.22
SNX1-208ENST00000559844 PLD2O14939 933 aa16.46■□□□□ 0.22
SNX1-208ENST00000559844 ZNF749O43361 778 aa16.46■□□□□ 0.22
SNX1-208ENST00000559844 LCKP06239 509 aa16.46■□□□□ 0.22
SNX1-208ENST00000559844 IGFBP1P08833 259 aaPredicted RBP16.46■□□□□ 0.22
SNX1-208ENST00000559844 STSP08842 583 aa16.46■□□□□ 0.22
SNX1-208ENST00000559844 ZNF182P17025 639 aaPredicted RBP16.46■□□□□ 0.22
SNX1-208ENST00000559844 S1PR1P21453 382 aa16.46■□□□□ 0.22
SNX1-208ENST00000559844 ID4P47928 161 aa16.46■□□□□ 0.22
SNX1-208ENST00000559844 MAT1AQ00266 395 aaKnown RBP16.46■□□□□ 0.22
SNX1-208ENST00000559844 CDK5Q00535 292 aa16.46■□□□□ 0.22
SNX1-208ENST00000559844 MC2RQ01718 297 aa16.46■□□□□ 0.22
SNX1-208ENST00000559844 IRF3Q14653 427 aa16.46■□□□□ 0.22
SNX1-208ENST00000559844 GINS1Q14691 196 aa16.46■□□□□ 0.22
SNX1-208ENST00000559844 MEDAGQ5VYS4 303 aa16.46■□□□□ 0.22
SNX1-208ENST00000559844 RASSF6Q6ZTQ3 369 aa16.46■□□□□ 0.22
SNX1-208ENST00000559844 PRICKLE2Q7Z3G6 844 aa16.46■□□□□ 0.22
SNX1-208ENST00000559844 GDF7Q7Z4P5 450 aa16.46■□□□□ 0.22
SNX1-208ENST00000559844 GPR135Q8IZ08 494 aa16.46■□□□□ 0.22
SNX1-208ENST00000559844 WDR36Q8NI36 951 aaKnown RBP16.46■□□□□ 0.22
SNX1-208ENST00000559844 CDCA4Q9BXL8 241 aa16.46■□□□□ 0.22
SNX1-208ENST00000559844 PRRG3Q9BZD7 231 aa16.46■□□□□ 0.22
SNX1-208ENST00000559844 ENAMQ9NRM1 1142 aa16.46■□□□□ 0.22
SNX1-208ENST00000559844 SLC39A1Q9NY26 324 aa16.46■□□□□ 0.22
SNX1-208ENST00000559844 RPL36Q9Y3U8 105 aaKnown RBP16.46■□□□□ 0.22
SNX1-208ENST00000559844 CLDN24A6NM45 220 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms