RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 PCMT1P22061 227 aa3□□□□□ -1.93
SPG11-218ENST00000559754 GIFP27352 417 aa3□□□□□ -1.93
SPG11-218ENST00000559754 RPL27P61353 136 aaKnown RBP3□□□□□ -1.93
SPG11-218ENST00000559754 BNIP1Q12981 228 aa3□□□□□ -1.93
SPG11-218ENST00000559754 ITPK1Q13572 414 aa3□□□□□ -1.93
SPG11-218ENST00000559754 WDR43Q15061 677 aaKnown RBP eCLIP3□□□□□ -1.93
SPG11-218ENST00000559754 STK11Q15831 433 aa3□□□□□ -1.93
SPG11-218ENST00000559754 KLHL40Q2TBA0 621 aa3□□□□□ -1.93
SPG11-218ENST00000559754 SFT2D3Q587I9 215 aa3□□□□□ -1.93
SPG11-218ENST00000559754 C6orf226Q5I0X4 101 aa3□□□□□ -1.93
SPG11-218ENST00000559754 DCAF12Q5T6F0 453 aa3□□□□□ -1.93
SPG11-218ENST00000559754 RAET1LQ5VY80 246 aa3□□□□□ -1.93
SPG11-218ENST00000559754 ATL3Q6DD88 541 aa3□□□□□ -1.93
SPG11-218ENST00000559754 FAM71F2Q6NXP2 309 aa3□□□□□ -1.93
SPG11-218ENST00000559754 EGFL6Q8IUX8 553 aa3□□□□□ -1.93
SPG11-218ENST00000559754 IQCF2Q8IXL9 164 aa3□□□□□ -1.93
SPG11-218ENST00000559754 DND1Q8IYX4 353 aaKnown RBP3□□□□□ -1.93
SPG11-218ENST00000559754 FBXL16Q8N461 479 aa3□□□□□ -1.93
SPG11-218ENST00000559754 DRAXINQ8NBI3 349 aaPredicted RBP3□□□□□ -1.93
SPG11-218ENST00000559754 OR5T2Q8NGG2 359 aa3□□□□□ -1.93
SPG11-218ENST00000559754 OR4D5Q8NGN0 318 aa3□□□□□ -1.93
SPG11-218ENST00000559754 OR5M9Q8NGP3 310 aa3□□□□□ -1.93
SPG11-218ENST00000559754 OR8K3Q8NH51 312 aa3□□□□□ -1.93
SPG11-218ENST00000559754 SCFD1Q8WVM8 642 aa3□□□□□ -1.93
SPG11-218ENST00000559754 DLX4Q92988 240 aaPredicted RBP3□□□□□ -1.93
SPG11-218ENST00000559754 HAVCR1Q96D42 359 aa3□□□□□ -1.93
SPG11-218ENST00000559754 C19orf60Q96EN9 201 aa3□□□□□ -1.93
SPG11-218ENST00000559754 C12orf66Q96MD2 445 aa3□□□□□ -1.93
SPG11-218ENST00000559754 ANKRD27Q96NW4 1050 aa3□□□□□ -1.93
SPG11-218ENST00000559754 CPXM1Q96SM3 734 aa3□□□□□ -1.93
SPG11-218ENST00000559754 TUBGCP2Q9BSJ2 902 aa3□□□□□ -1.93
SPG11-218ENST00000559754 RHOJQ9H4E5 214 aa3□□□□□ -1.93
SPG11-218ENST00000559754 XKR8Q9H6D3 395 aa3□□□□□ -1.93
SPG11-218ENST00000559754 ALG9Q9H6U8 611 aa3□□□□□ -1.93
SPG11-218ENST00000559754 C3orf14Q9HBI5 128 aa3□□□□□ -1.93
SPG11-218ENST00000559754 SLC25A19Q9HC21 320 aa3□□□□□ -1.93
SPG11-218ENST00000559754 RAB18Q9NP72 206 aa3□□□□□ -1.93
SPG11-218ENST00000559754 ZNF639Q9UID6 485 aa3□□□□□ -1.93
SPG11-218ENST00000559754 NPIPA1Q9UND3 350 aa3□□□□□ -1.93
SPG11-218ENST00000559754 MRPL11Q9Y3B7 192 aaKnown RBP3□□□□□ -1.93
SPG11-218ENST00000559754 NPTNQ9Y639 398 aa3□□□□□ -1.93
SPG11-218ENST00000559754 AFF2P51816 1311 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 PHLPP2Q6ZVD8 1323 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 NPIPA5A0A0B4J1W7 369 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 LINC00854A0A1B0GVQ3 168 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 LOC390937A0A1W2PQ73 354 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 ANHXE9PGG2 379 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 NPIPA5E9PKD4 350 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 NDUFS8O00217 210 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 OR7A17O14581 309 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 BCL2L11O43521 198 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 DNAJB6O75190 326 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 TRIM3O75382 744 aaPredicted RBP2.99□□□□□ -1.93
SPG11-218ENST00000559754 LRCH4O75427 683 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 CEACAM4O75871 244 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 B3GAT3O94766 335 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 IGF1P05019 195 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 HSMCR30P0CW71 290 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 DNAH10OSP0CZ25 163 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 OR8G3PP0DMU2 310 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 ANXA3P12429 323 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 H2AFXP16104 143 aaPredicted RBP2.99□□□□□ -1.93
SPG11-218ENST00000559754 RPL35AP18077 110 aaKnown RBP2.99□□□□□ -1.93
SPG11-218ENST00000559754 PGCP20142 388 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 C4BPBP20851 252 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 HOXD10P28358 340 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 CDKN1BP46527 198 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 ZFP36L2P47974 494 aaKnown RBP2.99□□□□□ -1.93
SPG11-218ENST00000559754 CASP4P49662 377 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 LBX1P52954 281 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 CARD18P57730 90 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 ABCE1P61221 599 aaKnown RBP2.99□□□□□ -1.93
SPG11-218ENST00000559754 BTG1P62324 171 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 ATXN7L3Q14CW9 347 aaPredicted RBP2.99□□□□□ -1.93
SPG11-218ENST00000559754 GGTA1PQ4G0N0 100 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 HSP90B2PQ58FF3 399 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 FBXO48Q5FWF7 155 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 XKR7Q5GH72 579 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 BEND6Q5SZJ8 279 aaPredicted RBP2.99□□□□□ -1.93
SPG11-218ENST00000559754 CELF3Q5SZQ8 465 aaKnown RBP2.99□□□□□ -1.93
SPG11-218ENST00000559754 OR4F3Q6IEY1 312 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 VITQ6UXI7 678 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 ZNF730Q6ZMV8 503 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 CENPQQ7L2Z9 268 aaPredicted RBP2.99□□□□□ -1.93
SPG11-218ENST00000559754 CHMP1BQ7LBR1 199 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 LUZP2Q86TE4 346 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 ACOT1Q86TX2 421 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 TMEM17Q86X19 198 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 CATSPERDQ86XM0 798 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 SLC22A15Q8IZD6 547 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 AQP11Q8NBQ7 271 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 RELL2Q8NC24 303 aaPredicted RBP2.99□□□□□ -1.93
SPG11-218ENST00000559754 ICA1LQ8NDH6 482 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 BPIFCQ8NFQ6 507 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 FAM81AQ8TBF8 368 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 FBXO25Q8TCJ0 367 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 ISG20Q96AZ6 181 aaKnown RBP2.99□□□□□ -1.93
SPG11-218ENST00000559754 PELI1Q96FA3 418 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 PSMB7Q99436 277 aa2.99□□□□□ -1.93
SPG11-218ENST00000559754 LGMNQ99538 433 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms