RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 RAB40ALP0C0E4 278 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 CCNYL3P0C7X3 344 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 GKN3PP0CG01 181 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 FOLR3P41439 243 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 ATP12AP54707 1039 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 LSM11P83369 360 aaKnown RBP eCLIP13.16□□□□□ -0.33e-9■□□□□ 10.4
RABGGTA-209ENST00000559551 FOXD4Q12950 439 aaPredicted RBP13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 LARS2Q15031 903 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 NDUFAF6Q330K2 333 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 SLC29A4Q7RTT9 530 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 ZDHHC13Q8IUH4 622 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 ELP5Q8TE02 316 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 THAP3Q8WTV1 239 aaPredicted RBP13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 PMM1Q92871 262 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 GRIP2Q9C0E4 1043 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 NMNAT1Q9HAN9 279 aaPredicted RBP13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 UBAP1Q9NZ09 502 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 C19orf25Q9UFG5 118 aaPredicted RBP13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 PCDHGB5Q9Y5G0 923 aa13.16□□□□□ -0.3
RABGGTA-209ENST00000559551 C17orf51A8MQB3 221 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 H0YJX3 145 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 TNFRSF11BO00300 401 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 GFRA3O60609 400 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 SNAP29O95721 258 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 ITGA2P17301 1181 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 MMP11P24347 488 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 HTR2AP28223 471 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 ABCD3P28288 659 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 STAT5AP42229 794 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 DAPP51397 102 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 ALDH3A2P51648 485 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 DCAF7P61962 342 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 GABREP78334 506 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 FGFBP1Q14512 234 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 SEC23BQ15437 767 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 DECR1Q16698 335 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 C6orf52Q5T4I8 152 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 TMEM164Q5U3C3 297 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 FNDC7Q5VTL7 733 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 HSDL2Q6YN16 418 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 C17orf47Q8NEP4 570 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 ADAMTS14Q8WXS8 1223 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 DIO2Q92813 273 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 ADOQ96SZ5 270 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 KLHDC3Q9BQ90 382 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 G6PC3Q9BUM1 346 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 USE1Q9NZ43 259 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 PDP1Q9P0J1 537 aaPredicted RBP13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 FARSAQ9Y285 508 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 SLC9A8Q9Y2E8 581 aa13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 MRPS18BQ9Y676 258 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-209ENST00000559551 CDRT15L2A8MXV6 281 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 SLC30A4O14863 429 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 ADAMDEC1O15204 470 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 OIP5O43482 229 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 RAD1O60671 282 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 MITFO75030 526 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 CYP4B1P13584 511 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 MYBPC1Q00872 1141 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 IL10RAQ13651 578 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 GK3PQ14409 553 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 CD226Q15762 336 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 KLHL26Q53HC5 615 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 NLGN4XQ8N0W4 816 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 ESX1Q8N693 406 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 ZNF614Q8N883 585 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 PIK3C3Q8NEB9 887 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 NLGN4YQ8NFZ3 816 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 NUBPLQ8TB37 319 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 OMA1Q96E52 524 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 POLR1BQ9H9Y6 1135 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 ASCL3Q9NQ33 180 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 DNAJB12Q9NXW2 375 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 ZNF232Q9UNY5 417 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 ABCB7O75027 752 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 ICOSLGO75144 302 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 ELAVL4P26378 380 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 RGS8P57771 180 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 DNASE1L3Q13609 305 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 HLA-DQA1Q5Y7H0 255 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 ZNF770Q6IQ21 691 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 FAHD1Q6P587 224 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 LYPD8Q6UX82 237 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 HIPK1Q86Z02 1210 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 SLC34A3Q8N130 599 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 OR9Q2Q8NGE9 314 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 TP53INP1Q96A56 240 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 ZNF524Q96C55 264 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 NRBF2Q96F24 287 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 CNBD2Q96M20 576 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 PRRC1Q96M27 445 aa13.14□□□□□ -0.31
RABGGTA-209ENST00000559551 CPSF4LA6NMK7 179 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-209ENST00000559551 WWP2O00308 870 aa13.13□□□□□ -0.31
RABGGTA-209ENST00000559551 MAN1A2O60476 641 aa13.13□□□□□ -0.31
RABGGTA-209ENST00000559551 UGT2B11O75310 529 aa13.13□□□□□ -0.31
RABGGTA-209ENST00000559551 REM1O75628 298 aa13.13□□□□□ -0.31
RABGGTA-209ENST00000559551 TRMUO75648 421 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-209ENST00000559551 GADD45GO95257 159 aa13.13□□□□□ -0.31
RABGGTA-209ENST00000559551 LYPD3O95274 346 aa13.13□□□□□ -0.31
RABGGTA-209ENST00000559551 UTS2O95399 124 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms