RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 REEP3Q6NUK4 255 aa19.75■□□□□ 0.75
SNX1-206ENST00000559389 HIPK4Q8NE63 616 aa19.75■□□□□ 0.75
SNX1-206ENST00000559389 OR2M3Q8NG83 312 aa19.75■□□□□ 0.75
SNX1-206ENST00000559389 OR4K17Q8NGC6 315 aa19.75■□□□□ 0.75
SNX1-206ENST00000559389 FBXO27Q8NI29 283 aa19.75■□□□□ 0.75
SNX1-206ENST00000559389 PHOSPHO1Q8TCT1 267 aa19.75■□□□□ 0.75
SNX1-206ENST00000559389 REXO5Q96IC2 774 aaKnown RBP19.75■□□□□ 0.75
SNX1-206ENST00000559389 NSL1Q96IY1 281 aa19.75■□□□□ 0.75
SNX1-206ENST00000559389 GPR137Q96N19 417 aa19.75■□□□□ 0.75
SNX1-206ENST00000559389 NCKAP5O14513 1909 aa19.74■□□□□ 0.75
SNX1-206ENST00000559389 NPIPA5E9PKD4 350 aa19.74■□□□□ 0.75
SNX1-206ENST00000559389 NME4O00746 187 aa19.74■□□□□ 0.75
SNX1-206ENST00000559389 CBR3O75828 277 aa19.74■□□□□ 0.75
SNX1-206ENST00000559389 UBL4AP11441 157 aa19.74■□□□□ 0.75
SNX1-206ENST00000559389 CALB2P22676 271 aa19.74■□□□□ 0.75
SNX1-206ENST00000559389 ADH7P40394 386 aa19.74■□□□□ 0.75
SNX1-206ENST00000559389 MNAT1P51948 309 aa19.74■□□□□ 0.75
SNX1-206ENST00000559389 PLAURQ03405 335 aa19.74■□□□□ 0.75
SNX1-206ENST00000559389 ZNF117Q03924 483 aa19.74■□□□□ 0.75
SNX1-206ENST00000559389 VMACQ2NL98 169 aa19.74■□□□□ 0.75
SNX1-206ENST00000559389 SLC30A8Q8IWU4 369 aa19.74■□□□□ 0.75
SNX1-206ENST00000559389 PEX5LQ8IYB4 626 aa19.74■□□□□ 0.75
SNX1-206ENST00000559389 PGAM4Q8N0Y7 254 aa19.74■□□□□ 0.75
SNX1-206ENST00000559389 FAM71CQ8NEG0 241 aa19.74■□□□□ 0.75
SNX1-206ENST00000559389 DUSP19Q8WTR2 217 aa19.74■□□□□ 0.75
SNX1-206ENST00000559389 WDR60Q8WVS4 1066 aa19.74■□□□□ 0.75
SNX1-206ENST00000559389 ZNF583Q96ND8 569 aa19.74■□□□□ 0.75
SNX1-206ENST00000559389 NPIPA1Q9UND3 350 aa19.74■□□□□ 0.75
SNX1-206ENST00000559389 NINQ8N4C6 2090 aa19.73■□□□□ 0.75
SNX1-206ENST00000559389 CCT8L1PA6NM43 557 aa19.73■□□□□ 0.75
SNX1-206ENST00000559389 OIP5O43482 229 aa19.73■□□□□ 0.75
SNX1-206ENST00000559389 WISP2O76076 250 aa19.73■□□□□ 0.75
SNX1-206ENST00000559389 DBIP07108 87 aaKnown RBP19.73■□□□□ 0.75
SNX1-206ENST00000559389 THBS1P07996 1170 aa19.73■□□□□ 0.75
SNX1-206ENST00000559389 CELA3AP09093 270 aa19.73■□□□□ 0.75
SNX1-206ENST00000559389 T-ENOLP0DO92 83 aa19.73■□□□□ 0.75
SNX1-206ENST00000559389 NID1P14543 1247 aa19.73■□□□□ 0.75
SNX1-206ENST00000559389 ETS2P15036 469 aa19.73■□□□□ 0.75
SNX1-206ENST00000559389 ENDOUP21128 410 aaKnown RBP19.73■□□□□ 0.75
SNX1-206ENST00000559389 PCBP3P57721 371 aaKnown RBP19.73■□□□□ 0.75
SNX1-206ENST00000559389 NDUFAF6Q330K2 333 aa19.73■□□□□ 0.75
SNX1-206ENST00000559389 ERICH5Q6P6B1 374 aa19.73■□□□□ 0.75
SNX1-206ENST00000559389 OR52P1PQ8NH57 321 aa19.73■□□□□ 0.75
SNX1-206ENST00000559389 MIB2Q96AX9 1013 aa19.73■□□□□ 0.75
SNX1-206ENST00000559389 DTNBP1Q96EV8 351 aa19.73■□□□□ 0.75
SNX1-206ENST00000559389 OR2B2Q9GZK3 357 aa19.73■□□□□ 0.75
SNX1-206ENST00000559389 DSN1Q9H410 356 aa19.73■□□□□ 0.75
SNX1-206ENST00000559389 PIF1Q9H611 641 aa19.73■□□□□ 0.75
SNX1-206ENST00000559389 SPAG4Q9NPE6 437 aa19.73■□□□□ 0.75
SNX1-206ENST00000559389 PLSCR2Q9NRY7 297 aa19.73■□□□□ 0.75
SNX1-206ENST00000559389 NDE1Q9NXR1 346 aa19.73■□□□□ 0.75
SNX1-206ENST00000559389 USP22Q9UPT9 525 aa19.73■□□□□ 0.75
SNX1-206ENST00000559389 SLC35A3Q9Y2D2 325 aa19.73■□□□□ 0.75
SNX1-206ENST00000559389 LIPGQ9Y5X9 500 aa19.73■□□□□ 0.75
SNX1-206ENST00000559389 GPC6Q9Y625 555 aaPredicted RBP19.73■□□□□ 0.75
SNX1-206ENST00000559389 SHANK1Q9Y566 2161 aa19.73■□□□□ 0.75
SNX1-206ENST00000559389 CLDN24A6NM45 220 aa19.72■□□□□ 0.75
SNX1-206ENST00000559389 ZNF264O43296 627 aa19.72■□□□□ 0.75
SNX1-206ENST00000559389 HCRTR2O43614 444 aa19.72■□□□□ 0.75
SNX1-206ENST00000559389 UBOX5O94941 541 aa19.72■□□□□ 0.75
SNX1-206ENST00000559389 CSTAP01040 98 aa19.72■□□□□ 0.75
SNX1-206ENST00000559389 IGHG3P01860 377 aa19.72■□□□□ 0.75
SNX1-206ENST00000559389 HPNP05981 417 aa19.72■□□□□ 0.75
SNX1-206ENST00000559389 EDN3P14138 238 aa19.72■□□□□ 0.75
SNX1-206ENST00000559389 AQP1P29972 269 aa19.72■□□□□ 0.75
SNX1-206ENST00000559389 SRD5A2P31213 254 aa19.72■□□□□ 0.75
SNX1-206ENST00000559389 PGM1P36871 562 aa19.72■□□□□ 0.75
SNX1-206ENST00000559389 SUMO3P55854 103 aaPredicted RBP19.72■□□□□ 0.75
SNX1-206ENST00000559389 SKP2Q13309 424 aa19.72■□□□□ 0.75
SNX1-206ENST00000559389 LIN52Q52LA3 116 aa19.72■□□□□ 0.75
SNX1-206ENST00000559389 EIF3MQ7L2H7 374 aaKnown RBP19.72■□□□□ 0.75
SNX1-206ENST00000559389 VRK2Q86Y07 508 aa19.72■□□□□ 0.75
SNX1-206ENST00000559389 CMIPQ8IY22 773 aa19.72■□□□□ 0.75
SNX1-206ENST00000559389 OR2T12Q8NG77 320 aa19.72■□□□□ 0.75
SNX1-206ENST00000559389 SH3YL1Q96HL8 342 aaPredicted RBP19.72■□□□□ 0.75
SNX1-206ENST00000559389 ACKR4Q9NPB9 350 aa19.72■□□□□ 0.75
SNX1-206ENST00000559389 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.72■□□□□ 0.75
SNX1-206ENST00000559389 MED11Q9P086 117 aa19.72■□□□□ 0.75
SNX1-206ENST00000559389 ZNF443Q9Y2A4 671 aaPredicted RBP19.72■□□□□ 0.75
SNX1-206ENST00000559389 CHD6Q8TD26 2715 aa19.72■□□□□ 0.75
SNX1-206ENST00000559389 BCAS1O75363 584 aaPredicted RBP19.71■□□□□ 0.75
SNX1-206ENST00000559389 IL7RP16871 459 aa19.71■□□□□ 0.75
SNX1-206ENST00000559389 MSX1P28360 303 aa19.71■□□□□ 0.75
SNX1-206ENST00000559389 EEFSECP57772 596 aaKnown RBP19.71■□□□□ 0.75
SNX1-206ENST00000559389 KCNJ10P78508 379 aa19.71■□□□□ 0.75
SNX1-206ENST00000559389 MXRA7P84157 204 aa19.71■□□□□ 0.75
SNX1-206ENST00000559389 SLC25A3Q00325 362 aa19.71■□□□□ 0.75
SNX1-206ENST00000559389 LIPEQ05469 1076 aa19.71■□□□□ 0.75
SNX1-206ENST00000559389 GANABQ14697 944 aaKnown RBP19.71■□□□□ 0.75
SNX1-206ENST00000559389 MRPL2Q5T653 305 aaKnown RBP19.71■□□□□ 0.75
SNX1-206ENST00000559389 RNF220Q5VTB9 566 aa19.71■□□□□ 0.75
SNX1-206ENST00000559389 CBLN3Q6UW01 205 aa19.71■□□□□ 0.75
SNX1-206ENST00000559389 C16orf89Q6UX73 402 aa19.71■□□□□ 0.75
SNX1-206ENST00000559389 ZNF836Q6ZNA1 936 aa19.71■□□□□ 0.75
SNX1-206ENST00000559389 KRT73Q86Y46 540 aa19.71■□□□□ 0.75
SNX1-206ENST00000559389 B4GALNT2Q8NHY0 566 aa19.71■□□□□ 0.75
SNX1-206ENST00000559389 C1GALT1C1Q96EU7 318 aa19.71■□□□□ 0.75
SNX1-206ENST00000559389 KLHDC3Q9BQ90 382 aa19.71■□□□□ 0.75
SNX1-206ENST00000559389 DEFB127Q9H1M4 99 aa19.71■□□□□ 0.75
SNX1-206ENST00000559389 SLC6A15Q9H2J7 730 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms