RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 PLSCR2Q9NRY7 297 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 OLAHQ9NV23 265 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 MRGBPQ9NV56 204 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 RLIMQ9NVW2 624 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 ABCD2Q9UBJ2 740 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 P2RX2Q9UBL9 471 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 ICAM5Q9UMF0 924 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 LIPT1Q9Y234 373 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 DTNAQ9Y4J8 743 aa9.91□□□□□ -0.82
TPM1-217ENST00000559108 A0A1W2PQD3 144 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 AP3D1O14617 1153 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 ZIC3O60481 467 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 AGR2O95994 175 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 AK1P00568 194 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 NPPAP01160 153 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 OPN1SWP03999 348 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 PRG2P13727 222 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 ATP6V1C1P21283 382 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 PPIBP23284 216 aaKnown RBP9.9□□□□□ -0.82
TPM1-217ENST00000559108 LCN1P31025 176 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 PCGF2P35227 344 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 MASP1P48740 699 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 GSK3BP49841 420 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 PSMD4P55036 377 aaKnown RBP9.9□□□□□ -0.82
TPM1-217ENST00000559108 EEF1A1P68104 462 aaKnown RBP9.9□□□□□ -0.82
TPM1-217ENST00000559108 CBX1P83916 185 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 PLGLB1Q02325 96 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 DMTNQ08495 405 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 SCARB2Q14108 478 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 CYP51A1Q16850 503 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 WIPI1Q5MNZ9 446 aaPredicted RBP9.9□□□□□ -0.82
TPM1-217ENST00000559108 C6orf89Q6UWU4 347 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 TRPM8Q7Z2W7 1104 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 SERPINA11Q86U17 422 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 YRDCQ86U90 279 aaKnown RBP9.9□□□□□ -0.82
TPM1-217ENST00000559108 CLIP4Q8N3C7 705 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 FAM109AQ8N4B1 249 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 RNF148Q8N7C7 305 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 ZNF614Q8N883 585 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 PCYOX1LQ8NBM8 494 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 FAM156AQ8NDB6 213 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 RBM15BQ8NDT2 890 aaKnown RBP9.9□□□□□ -0.82
TPM1-217ENST00000559108 FAM83FQ8NEG4 500 aaPredicted RBP9.9□□□□□ -0.82
TPM1-217ENST00000559108 GPR32P1Q8NGA4 272 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 OR5M1Q8NGP8 315 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 OR1J4Q8NGS1 313 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 POC1BQ8TC44 478 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 TAMM41Q96BW9 452 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 CMTM5Q96DZ9 223 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 GPR137Q96N19 417 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 TBL1XR1Q9BZK7 514 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 RAD21L1Q9H4I0 556 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 EFCAB1Q9HAE3 211 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 BCL2L10Q9HD36 194 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 POLE3Q9NRF9 147 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 RYDENQ9NUL5 291 aaKnown RBP9.9□□□□□ -0.82
TPM1-217ENST00000559108 DNAJB12Q9NXW2 375 aaKnown RBP9.9□□□□□ -0.82
TPM1-217ENST00000559108 PPP4R1LQ9P1A2 415 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 MRTO4Q9UKD2 239 aaKnown RBP9.9□□□□□ -0.82
TPM1-217ENST00000559108 BOKQ9UMX3 212 aaPredicted RBP9.9□□□□□ -0.82
TPM1-217ENST00000559108 CARD8Q9Y2G2 431 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 SLC6A5Q9Y345 797 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 PCDHGB3Q9Y5G1 929 aa9.9□□□□□ -0.82
TPM1-217ENST00000559108 GPC6Q9Y625 555 aaPredicted RBP9.9□□□□□ -0.82
TPM1-217ENST00000559108 PRORSD1PA6NEY8 169 aa9.89□□□□□ -0.83
TPM1-217ENST00000559108 EVPLLA8MZ36 301 aa9.89□□□□□ -0.83
TPM1-217ENST00000559108 FAM220BPB1ANY3 271 aa9.89□□□□□ -0.83
TPM1-217ENST00000559108 KDM4EB2RXH2 506 aaPredicted RBP9.89□□□□□ -0.83
TPM1-217ENST00000559108 SCDO00767 359 aa9.89□□□□□ -0.83
TPM1-217ENST00000559108 TFECO14948 347 aaPredicted RBP9.89□□□□□ -0.83
TPM1-217ENST00000559108 FRS3O43559 492 aa9.89□□□□□ -0.83
TPM1-217ENST00000559108 NDUFB5O43674 189 aa9.89□□□□□ -0.83
TPM1-217ENST00000559108 DNAJA2O60884 412 aa9.89□□□□□ -0.83
TPM1-217ENST00000559108 IGHG3P01860 377 aa9.89□□□□□ -0.83
TPM1-217ENST00000559108 HPNP05981 417 aa9.89□□□□□ -0.83
TPM1-217ENST00000559108 PLA2G2AP14555 144 aa9.89□□□□□ -0.83
TPM1-217ENST00000559108 IL11P20809 199 aa9.89□□□□□ -0.83
TPM1-217ENST00000559108 PSMA4P25789 261 aaKnown RBP9.89□□□□□ -0.83
TPM1-217ENST00000559108 GDF1P27539 372 aa9.89□□□□□ -0.83
TPM1-217ENST00000559108 RPP38P78345 283 aaKnown RBP9.89□□□□□ -0.83
TPM1-217ENST00000559108 TXNL4AP83876 142 aaKnown RBP9.89□□□□□ -0.83
TPM1-217ENST00000559108 LIPEQ05469 1076 aa9.89□□□□□ -0.83
TPM1-217ENST00000559108 C3AR1Q16581 482 aa9.89□□□□□ -0.83
TPM1-217ENST00000559108 VMACQ2NL98 169 aa9.89□□□□□ -0.83
TPM1-217ENST00000559108 TMEM44Q2T9K0 475 aa9.89□□□□□ -0.83
TPM1-217ENST00000559108 EMC4Q5J8M3 183 aa9.89□□□□□ -0.83
TPM1-217ENST00000559108 MRPL2Q5T653 305 aaKnown RBP9.89□□□□□ -0.83
TPM1-217ENST00000559108 PACS2Q86VP3 889 aa9.89□□□□□ -0.83
TPM1-217ENST00000559108 TSPYL5Q86VY4 417 aaPredicted RBP9.89□□□□□ -0.83
TPM1-217ENST00000559108 PHOSPHO1Q8TCT1 267 aa9.89□□□□□ -0.83
TPM1-217ENST00000559108 C1GALT1C1Q96EU7 318 aa9.89□□□□□ -0.83
TPM1-217ENST00000559108 NSL1Q96IY1 281 aa9.89□□□□□ -0.83
TPM1-217ENST00000559108 OR2B2Q9GZK3 357 aa9.89□□□□□ -0.83
TPM1-217ENST00000559108 TMEM181Q9P2C4 612 aa9.89□□□□□ -0.83
TPM1-217ENST00000559108 ZNF443Q9Y2A4 671 aaPredicted RBP9.89□□□□□ -0.83
TPM1-217ENST00000559108 HIVEP3Q5T1R4 2406 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 ARHGAP21Q5T5U3 1957 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 MPDZO75970 2070 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 A0A0G2JPF8 293 aa9.88□□□□□ -0.83
TPM1-217ENST00000559108 A0A1B0GTH9 108 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms