RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 C11orf24Q96F05 449 aaPredicted RBP1.9□□□□□ -2.11
GABPB1-209ENST00000559100 PELI1Q96FA3 418 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 TIMD4Q96H15 378 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 MS4A14Q96JA4 679 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 SLC45A3Q96JT2 553 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 CNOT6LQ96LI5 555 aaKnown RBP1.9□□□□□ -2.11
GABPB1-209ENST00000559100 AGAP3Q96P47 875 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 DUX3Q96PT4 197 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 OR5B2Q96R09 309 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 SLC6A7Q99884 636 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 ATF6BQ99941 703 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 TRIM51Q9BSJ1 452 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 RBM4Q9BWF3 364 aaKnown RBP1.9□□□□□ -2.11
GABPB1-209ENST00000559100 DUSP16Q9BY84 665 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 GPR61Q9BZJ8 451 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 PARLQ9H300 379 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 LRRN3Q9H3W5 708 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 ZNF696Q9H7X3 374 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 BARHL2Q9NY43 387 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 IL36GQ9NZH8 169 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 THAP10Q9P2Z0 257 aaPredicted RBP1.9□□□□□ -2.11
GABPB1-209ENST00000559100 PRODH2Q9UF12 536 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 SLC2A6Q9UGQ3 507 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 NPIPA1Q9UND3 350 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 RNF24Q9Y225 148 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 MEMO1Q9Y316 297 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 IFT52Q9Y366 437 aa1.9□□□□□ -2.11
GABPB1-209ENST00000559100 IGLV4-3A0A075B6K6 122 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 A0A1W2PNV4 684 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 HEATR9A2RTY3 570 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 PRR23AA6NEV1 266 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 LRRIQ4A6NIV6 560 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 ACOD1A6NK06 481 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 RPL37AP8A6NKH3 93 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 OR52A4PA6NMU1 304 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 EFCAB7A8K855 629 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 ZNF487B1APH4 448 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 PRSS44E7EML9 344 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 H3BMQ9 156 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 K7EQG2 157 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 HIP1O00291 1037 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 FOXE1O00358 373 aaPredicted RBP1.89□□□□□ -2.11
GABPB1-209ENST00000559100 ARHGEF9O43307 516 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 EFNA2O43921 213 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 SNAP91O60641 907 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 SRPX2O60687 465 aaPredicted RBP1.89□□□□□ -2.11
GABPB1-209ENST00000559100 DIRAS1O95057 198 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 OPN1LWP04000 364 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 SP1P08047 785 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 SNRPCP09234 159 aaKnown RBP1.89□□□□□ -2.11
GABPB1-209ENST00000559100 ALPIP09923 528 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 PVRP15151 417 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 TNNI1P19237 187 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 BCL3P20749 454 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 CYP2B6P20813 491 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 IMPDH1P20839 514 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 SERPINA2P20848 420 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 IDSP22304 550 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 UGT1A4P22310 534 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 ANXA13P27216 316 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 GCAP28676 217 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 GNA11P29992 359 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 RPL13AP40429 203 aaKnown RBP1.89□□□□□ -2.11
GABPB1-209ENST00000559100 TPMTP51580 245 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 ARHGDIBP52566 201 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 ATP1B3P54709 279 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 PRRX1P54821 245 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 CDH4P55283 916 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 GSCP56915 257 aaPredicted RBP1.89□□□□□ -2.11
GABPB1-209ENST00000559100 RPL8P62917 257 aaKnown RBP1.89□□□□□ -2.11
GABPB1-209ENST00000559100 CSTF1Q05048 431 aaKnown RBP1.89□□□□□ -2.11
GABPB1-209ENST00000559100 BST1Q10588 318 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 ST3GAL3Q11203 375 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 PPP1R7Q15435 360 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 DPYSL2Q16555 572 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 TRIM16LQ309B1 348 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 SNAI3Q3KNW1 292 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 TP53I3Q53FA7 332 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 DCST2Q5T1A1 773 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 ARMC12Q5T9G4 340 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 LGSNQ5TDP6 509 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 PRAMEF20Q5VT98 475 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 RUSC1-AS1Q66K80 236 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 ATL3Q6DD88 541 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 OR2A2Q6IF42 318 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 REG3GQ6UW15 175 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 GCNT7Q6ZNI0 430 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 TRPM8Q7Z2W7 1104 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 TPRA1Q86W33 373 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 LINC01561Q8N1V8 128 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 ZNF491Q8N8L2 437 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 OR5L2Q8NGL0 311 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 OR1L4Q8NGR5 311 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 OR1F12Q8NHA8 337 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 MIPOL1Q8TD10 442 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 SSC4DQ8WTU2 575 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 IL1F10Q8WWZ1 152 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 CRYGNQ8WXF5 182 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 NT5C3BQ969T7 300 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 C11orf52Q96A22 123 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms