RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 ADAM10O14672 748 aa16.56■□□□□ 0.24
CLPX-203ENST00000558958 BCAS1O75363 584 aaPredicted RBP16.56■□□□□ 0.24
CLPX-203ENST00000558958 VLDLRP98155 873 aa16.56■□□□□ 0.24
CLPX-203ENST00000558958 RIPK1Q13546 671 aa16.56■□□□□ 0.24
CLPX-203ENST00000558958 CD226Q15762 336 aa16.56■□□□□ 0.24
CLPX-203ENST00000558958 IQCCQ4KMZ1 466 aa16.56■□□□□ 0.24
CLPX-203ENST00000558958 INO80CQ6PI98 192 aaPredicted RBP16.56■□□□□ 0.24
CLPX-203ENST00000558958 ISLR2Q6UXK2 745 aa16.56■□□□□ 0.24
CLPX-203ENST00000558958 MARCH3Q86UD3 253 aa16.56■□□□□ 0.24
CLPX-203ENST00000558958 CARM1Q86X55 608 aa16.56■□□□□ 0.24
CLPX-203ENST00000558958 OR4D11Q8NGI4 311 aa16.56■□□□□ 0.24
CLPX-203ENST00000558958 CNOT9Q92600 299 aaKnown RBP16.56■□□□□ 0.24
CLPX-203ENST00000558958 DNAJB12Q9NXW2 375 aaKnown RBP16.56■□□□□ 0.24
CLPX-203ENST00000558958 H3BNH8 94 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 M0R3H8 397 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 TAF4O00268 1085 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 CEACAM4O75871 244 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 CSTAP01040 98 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 MT-ND1P03886 318 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 FABP3P05413 133 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 ITPKBP27987 946 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 CYB561P49447 251 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 CLK3P49761 638 aaKnown RBP16.55■□□□□ 0.24
CLPX-203ENST00000558958 UCNP55089 124 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 RPP38P78345 283 aaKnown RBP16.55■□□□□ 0.24
CLPX-203ENST00000558958 TMEM81Q6P7N7 255 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 RTL4Q6ZR62 310 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 LINC00696Q6ZRV3 163 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 PIWIL3Q7Z3Z3 882 aaKnown RBP16.55■□□□□ 0.24
CLPX-203ENST00000558958 TSEN54Q7Z6J9 526 aaKnown RBP16.55■□□□□ 0.24
CLPX-203ENST00000558958 LACC1Q8IV20 430 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 ZDHHC21Q8IVQ6 265 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 CYP4Z2PQ8N1L4 340 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 GATSQ8NAP1 163 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 FAM71CQ8NEG0 241 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 FDCSPQ8NFU4 85 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 PHOSPHO1Q8TCT1 267 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 PAQR8Q8TEZ7 354 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 AMBRA1Q9C0C7 1298 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 EVA1AQ9H8M9 152 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 CPNE5Q9HCH3 593 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 ANKRD10Q9NXR5 420 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 LOC400499M0QZD8 3231 aa16.55■□□□□ 0.24
CLPX-203ENST00000558958 A0A087WV48 116 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 H0Y3Z8 333 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 hCG_2039718K7EN88 272 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 HNRNPRO43390 633 aaKnown RBP16.54■□□□□ 0.24
CLPX-203ENST00000558958 FRS3O43559 492 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 NDUFB5O43674 189 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 SCO2O43819 266 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 TIPRLO75663 272 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 ANGPTL1O95841 491 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 WDPCPO95876 746 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 IFNW1P05000 195 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 UBL4AP11441 157 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 ENDOUP21128 410 aaKnown RBP16.54■□□□□ 0.24
CLPX-203ENST00000558958 CD96P40200 585 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 PTGDSP41222 190 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 CASP3P42574 277 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 GAS1P54826 345 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 MFAP5Q13361 173 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 TUBA3CQ13748 450 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 RCN1Q15293 331 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 SLC22A10Q63ZE4 541 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 BICRALQ6AI39 1079 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 TUBA3EQ6PEY2 450 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 ZNF227Q86WZ6 799 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 RBM45Q8IUH3 476 aaKnown RBP16.54■□□□□ 0.24
CLPX-203ENST00000558958 OR6T1Q8NGN1 323 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 VANGL1Q8TAA9 524 aaPredicted RBP16.54■□□□□ 0.24
CLPX-203ENST00000558958 SLC35B4Q969S0 331 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 UTP23Q9BRU9 249 aaKnown RBP16.54■□□□□ 0.24
CLPX-203ENST00000558958 DCLRE1BQ9H816 532 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 YY1AP1Q9H869 796 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 METTL7AQ9H8H3 244 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 NDUFAF4Q9P032 175 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 CNOT11Q9UKZ1 510 aaKnown RBP16.54■□□□□ 0.24
CLPX-203ENST00000558958 CPAMD8Q8IZJ3 1885 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 UBTFL6P0CB48 400 aaPredicted RBP16.54■□□□□ 0.24
CLPX-203ENST00000558958 CCL3P10147 92 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 CASRP41180 1078 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 ZNF136P52737 540 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 TMPRSS3P57727 454 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 RGS8P57771 180 aaPredicted RBP16.54■□□□□ 0.24
CLPX-203ENST00000558958 OC90Q02509 493 aaPredicted RBP16.54■□□□□ 0.24
CLPX-203ENST00000558958 SNTA1Q13424 505 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 NPTX1Q15818 432 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 NDUFAF6Q330K2 333 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 MDGA2Q7Z553 956 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 MISPQ8IVT2 679 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 ZCCHC14Q8WYQ9 949 aaKnown RBP16.54■□□□□ 0.24
CLPX-203ENST00000558958 NTNG2Q96CW9 530 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 GALNT9Q9HCQ5 603 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 EXOSC3Q9NQT5 275 aaKnown RBP16.54■□□□□ 0.24
CLPX-203ENST00000558958 KLRF1Q9NZS2 232 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 CNIH4Q9P003 139 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 ENPP4Q9Y6X5 453 aa16.54■□□□□ 0.24
CLPX-203ENST00000558958 NINQ8N4C6 2090 aa16.53■□□□□ 0.24
CLPX-203ENST00000558958 GTPBP1O00178 669 aaKnown RBP16.53■□□□□ 0.24
CLPX-203ENST00000558958 ZNF264O43296 627 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms