RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 ACSM5Q6NUN0 579 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 FAM71F2Q6NXP2 309 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 REG3GQ6UW15 175 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 C2orf66Q6UXQ4 117 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 ACOT1Q86TX2 421 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 MCOLN2Q8IZK6 566 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 CADM2Q8N3J6 435 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.45□□□□□ -1.86
CASC4-206ENST00000558847 ANKFN1Q8N957 763 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 ZNF485Q8NCK3 441 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 C18orf25Q96B23 403 aaPredicted RBP3.45□□□□□ -1.86
CASC4-206ENST00000558847 PPP1R16AQ96I34 528 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 C1orf147Q96MC9 270 aaPredicted RBP3.45□□□□□ -1.86
CASC4-206ENST00000558847 OR5M11Q96RB7 305 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 SLC39A3Q9BRY0 314 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 PPDPFQ9H3Y8 114 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 LRRC40Q9H9A6 602 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 MEPEQ9NQ76 525 aaPredicted RBP3.45□□□□□ -1.86
CASC4-206ENST00000558847 PAK5Q9P286 719 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 ARMCX1Q9P291 453 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 TBK1Q9UHD2 729 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 OARD1Q9Y530 152 aa3.45□□□□□ -1.86
CASC4-206ENST00000558847 ESYT2A0FGR8 921 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 ZSCAN5BA6NJL1 495 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 GPRIN2O60269 458 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 SRPX2O60687 465 aaPredicted RBP3.44□□□□□ -1.86
CASC4-206ENST00000558847 TM7SF2O76062 418 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 LRATO95237 230 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 ALPIP09923 528 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 HSMCR30P0CW71 290 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 ZNF44P15621 663 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 GCFC2P16383 781 aaKnown RBP3.44□□□□□ -1.86
CASC4-206ENST00000558847 SERPINA2P20848 420 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 DHPSP49366 369 aaPredicted RBP3.44□□□□□ -1.86
CASC4-206ENST00000558847 RPL8P62917 257 aaKnown RBP3.44□□□□□ -1.86
CASC4-206ENST00000558847 IL24Q13007 206 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 PEX6Q13608 980 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 SYPL1Q16563 259 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 NDUFA9Q16795 377 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 RNLSQ5VYX0 342 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 CENPPQ6IPU0 288 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 PRSS48Q7RTY5 328 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 MOB3BQ86TA1 216 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 CCDC50Q8IVM0 306 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 EMG1Q92979 244 aaKnown RBP3.44□□□□□ -1.86
CASC4-206ENST00000558847 OR5B2Q96R09 309 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 ATOH8Q96SQ7 321 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 GORASP2Q9H8Y8 452 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 ELOVL3Q9HB03 270 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 NANSQ9NR45 359 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 NUDT15Q9NV35 164 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 XPO7Q9UIA9 1087 aaKnown RBP3.44□□□□□ -1.86
CASC4-206ENST00000558847 CSAG2Q9Y5P2 127 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 ALG6Q9Y672 507 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 PTCH1Q13635 1447 aa3.44□□□□□ -1.86
CASC4-206ENST00000558847 A8MX80 341 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 E9PLD3 99 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 BTN3A3O00478 584 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 OR7A17O14581 309 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 GPAA1O43292 621 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 PALMO75781 387 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 B3GAT3O94766 335 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 SLC2A10O95528 541 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 LAMP1P11279 417 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 FOLR2P14207 255 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 CPN1P15169 458 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 PGAM2P15259 253 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 ACADSP16219 412 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 CEBPDP49716 269 aaPredicted RBP3.43□□□□□ -1.86
CASC4-206ENST00000558847 RPL32P62910 135 aaKnown RBP3.43□□□□□ -1.86
CASC4-206ENST00000558847 VLDLRP98155 873 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 CD47Q08722 323 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 RAB40BQ12829 278 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 ZNF154Q13106 437 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 RIPK1Q13546 671 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 KCNJ11Q14654 390 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 CEP55Q53EZ4 464 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 CCBE1Q6UXH8 406 aaPredicted RBP3.43□□□□□ -1.86
CASC4-206ENST00000558847 BAIAP2L2Q6UXY1 529 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 Q6ZPB1 254 aaPredicted RBP3.43□□□□□ -1.86
CASC4-206ENST00000558847 CYS1Q717R9 158 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 C16orf62Q7Z3J2 963 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 KIAA1328Q86T90 577 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 SERPINA9Q86WD7 417 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 MARCH9Q86YJ5 346 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 CSNK1A1LQ8N752 337 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 FAM133AQ8N9E0 248 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 Q8N9G6 341 aaPredicted RBP3.43□□□□□ -1.86
CASC4-206ENST00000558847 OR2T3Q8NH03 318 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 CNIH3Q8TBE1 160 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 FAM222BQ8WU58 562 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 TRUB1Q8WWH5 349 aaKnown RBP3.43□□□□□ -1.86
CASC4-206ENST00000558847 FAM3CQ92520 227 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 SLC6A7Q99884 636 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 RHOJQ9H4E5 214 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 ZNF385DQ9H6B1 395 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 MEAF6Q9HAF1 191 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 APMAPQ9HDC9 416 aa3.43□□□□□ -1.86
CASC4-206ENST00000558847 PNO1Q9NRX1 252 aaKnown RBP3.43□□□□□ -1.86
CASC4-206ENST00000558847 SMPD3Q9NY59 655 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms