RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 WARS2Q9UGM6 360 aaKnown RBP9.52□□□□□ -0.88
TPM1-212ENST00000558347 TEKT2Q9UIF3 430 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 GMPPBQ9Y5P6 360 aa9.52□□□□□ -0.88
TPM1-212ENST00000558347 MAST4O15021 2626 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 C1orf226A1L170 272 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 SAGE2PA6NJ88 616 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 A8MUA0 341 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 A8MVJ9 347 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 TGFBR3LH3BV60 316 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 RNASET2O00584 256 aaKnown RBP9.51□□□□□ -0.89
TPM1-212ENST00000558347 PRAMEF2O60811 474 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 SULT1C4O75897 302 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 LAMP1P11279 417 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 GP1BBP13224 206 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 EDN3P14138 238 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 EFNA1P20827 205 aaPredicted RBP9.51□□□□□ -0.89
TPM1-212ENST00000558347 PRKACGP22612 351 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 CERS1P27544 350 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 SERPINB10P48595 397 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 CLK3P49761 638 aaKnown RBP9.51□□□□□ -0.89
TPM1-212ENST00000558347 TDGF1P3P51864 188 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 EMX1Q04741 257 aaPredicted RBP9.51□□□□□ -0.89
TPM1-212ENST00000558347 FADDQ13158 208 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 SLAMF1Q13291 335 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 MAD2L1BPQ15013 274 aaPredicted RBP9.51□□□□□ -0.89
TPM1-212ENST00000558347 CTF1Q16619 201 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 HIST2H2BCQ6DN03 193 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 TUBA3EQ6PEY2 450 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 DCDC5Q6ZRR9 648 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 ZNF621Q6ZSS3 439 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 PRSS48Q7RTY5 328 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 BCORP1Q8N888 145 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 FCGR1BQ92637 280 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 PPCDCQ96CD2 204 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 HSH2DQ96JZ2 352 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 ZNF354BQ96LW1 612 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 SIGLEC12Q96PQ1 595 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 GABARAPL3Q9BY60 117 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 RIBC2Q9H4K1 309 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 HMG20AQ9NP66 347 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 PAK1IP1Q9NWT1 392 aaPredicted RBP9.51□□□□□ -0.89
TPM1-212ENST00000558347 ADPRHL2Q9NX46 363 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 TEX10Q9NXF1 929 aaPredicted RBP9.51□□□□□ -0.89
TPM1-212ENST00000558347 MS4A12Q9NXJ0 267 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 GIN1Q9NXP7 522 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 KCMF1Q9P0J7 381 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 KIF17Q9P2E2 1029 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 PHF11Q9UIL8 331 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 DAPP1Q9UN19 280 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 ABCG2Q9UNQ0 655 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 ERGIC3Q9Y282 383 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 CLDN16Q9Y5I7 305 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 ICE1Q9Y2F5 2266 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 CLDN25C9JDP6 229 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 PROM1O43490 865 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 RGS10O43665 173 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 CD96P40200 585 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 FRKP42685 505 aaPredicted RBP9.51□□□□□ -0.89
TPM1-212ENST00000558347 RAB38P57729 211 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 PMP22Q01453 160 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 RBBP4Q09028 425 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 SPCS2Q15005 226 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 NPTX1Q15818 432 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 INAQ16352 499 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 RGS21Q2M5E4 152 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 ZNF385BQ569K4 471 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 NDUFAF5Q5TEU4 345 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 ANKRD34AQ69YU3 496 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 EGFL6Q8IUX8 553 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 SLC15A4Q8N697 577 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 NFAM1Q8NET5 270 aaPredicted RBP9.51□□□□□ -0.89
TPM1-212ENST00000558347 GOT1L1Q8NHS2 421 aaPredicted RBP9.51□□□□□ -0.89
TPM1-212ENST00000558347 SGCDQ92629 289 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 DGCR6LQ9BY27 220 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 HES7Q9BYE0 225 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 TPT1P8Q9HAU6 139 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 MIEF1Q9NQG6 463 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 KRT84Q9NSB2 600 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 PLCXD1Q9NUJ7 323 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 RHBDL2Q9NX52 303 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 PDP1Q9P0J1 537 aaPredicted RBP9.51□□□□□ -0.89
TPM1-212ENST00000558347 SH3BP4Q9P0V3 963 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 SAMHD1Q9Y3Z3 626 aaKnown RBP9.51□□□□□ -0.89
TPM1-212ENST00000558347 ATG4BQ9Y4P1 393 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 MMACHCQ9Y4U1 282 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 PCDHGB3Q9Y5G1 929 aa9.51□□□□□ -0.89
TPM1-212ENST00000558347 POLEQ07864 2286 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 A0A1W2PR48 441 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 A1L4Q6 167 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 WIPF3A6NGB9 483 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 MYO1GB0I1T2 1018 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 PTGES3LE9PB15 166 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 CYR61O00622 381 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 KPNA4O00629 521 aaPredicted RBP9.5□□□□□ -0.89
TPM1-212ENST00000558347 MITFO75030 526 aaPredicted RBP9.5□□□□□ -0.89
TPM1-212ENST00000558347 WISP2O76076 250 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 INMTO95050 263 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 CPSF4O95639 269 aaKnown RBP9.5□□□□□ -0.89
TPM1-212ENST00000558347 AIFM1O95831 613 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 HNRNPCP07910 306 aaKnown RBP eCLIP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms