RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 ST6GALNAC2Q9UJ37 374 aa10.73□□□□□ -0.69
HERC1-202ENST00000558324 AP4B1Q9Y6B7 739 aa10.73□□□□□ -0.69
HERC1-202ENST00000558324 KCNE3Q9Y6H6 103 aa10.73□□□□□ -0.69
HERC1-202ENST00000558324 A0A087WZY1 265 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 UQCRHLA0A096LP55 91 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 FAM221AA4D161 298 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 SH3D21A4FU49 640 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 A8MXE2 369 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 MSTNO14793 375 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 TM9SF1O15321 606 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 BIRC5O15392 142 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 TNFRSF21O75509 655 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 AQP8O94778 261 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 NUDT14O95848 222 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 MYZAPP0CAP1 466 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 ZNF17P17021 662 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 SLC1A6P48664 564 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 EEF1A1P68104 462 aaKnown RBP10.72□□□□□ -0.69
HERC1-202ENST00000558324 HBA1P69905 142 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 ZNF117Q03924 483 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 EMX2Q04743 252 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 FAM27E3Q08E93 113 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 MAD2L1Q13257 205 aaPredicted RBP10.72□□□□□ -0.69
HERC1-202ENST00000558324 MPP2Q14168 576 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 DAZAP2Q15038 168 aaPredicted RBP10.72□□□□□ -0.69
HERC1-202ENST00000558324 PLPPR5Q32ZL2 321 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 NDUFAF6Q330K2 333 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 GLYR1Q49A26 553 aaPredicted RBP10.72□□□□□ -0.69
HERC1-202ENST00000558324 EEF1A1P5Q5VTE0 462 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 OR4F3Q6IEY1 312 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 SPNS3Q6ZMD2 512 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 GTPBP8Q8N3Z3 284 aaPredicted RBP10.72□□□□□ -0.69
HERC1-202ENST00000558324 NATD1Q8N6N6 113 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 METTL25Q8N6Q8 603 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 B4GALNT2Q8NHY0 566 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 PSMA8Q8TAA3 256 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 SFXN5Q8TD22 340 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 PGM2Q96G03 612 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 SORT1Q99523 831 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 NUF2Q9BZD4 464 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 PRRG4Q9BZD6 226 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 RNF122Q9H9V4 155 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 SSU72Q9NP77 194 aaKnown RBP10.72□□□□□ -0.69
HERC1-202ENST00000558324 RAB21Q9UL25 225 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 CLEC4AQ9UMR7 237 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 RAP2CQ9Y3L5 183 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 ZNF175Q9Y473 711 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 CCDC168Q8NDH2 2452 aa10.72□□□□□ -0.69
HERC1-202ENST00000558324 ANKRD17O75179 2603 aaKnown RBP10.71□□□□□ -0.69
HERC1-202ENST00000558324 RNF103-CHMP3A0A140T963 221 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 TNFSF11O14788 317 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 OIP5O43482 229 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 CRHP06850 196 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 KRT16P08779 473 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 DHRS4L1P0CG22 281 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 FCGR2AP12318 317 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 CD1EP15812 388 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 ME2P23368 584 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 DNASE1P24855 282 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 LCN1P31025 176 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 KIR2DL2P43627 348 aaPredicted RBP10.71□□□□□ -0.69
HERC1-202ENST00000558324 SLC6A8P48029 635 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 KCNJ5P48544 419 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 RPL14P50914 215 aaKnown RBP10.71□□□□□ -0.69
HERC1-202ENST00000558324 CASP9P55211 416 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 CLDN8P56748 225 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 FOXF1Q12946 379 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 STX3Q13277 289 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.71□□□□□ -0.69
HERC1-202ENST00000558324 ANKRD46Q86W74 232 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 MISPQ8IVT2 679 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 WDR75Q8IWA0 830 aaKnown RBP10.71□□□□□ -0.69
HERC1-202ENST00000558324 TMCO5AQ8N6Q1 288 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 ZNF527Q8NB42 609 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 OR4A15Q8NGL6 344 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 OR10D3Q8NH80 312 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 ZBTB8AQ96BR9 441 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 DACH2Q96NX9 599 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 OR7D2Q96RA2 312 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 DPY30Q9C005 99 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 SERHL2Q9H4I8 314 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 HHATLQ9HCP6 504 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 PNPOQ9NVS9 261 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 KLHL28Q9NXS3 571 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 ASIC5Q9NY37 505 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 STOML1Q9UBI4 398 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 CARD8Q9Y2G2 431 aa10.71□□□□□ -0.69
HERC1-202ENST00000558324 A0A1W2PQD3 144 aa10.7□□□□□ -0.7
HERC1-202ENST00000558324 ESPNB1AK53 854 aa10.7□□□□□ -0.7
HERC1-202ENST00000558324 CASKO14936 926 aa10.7□□□□□ -0.7
HERC1-202ENST00000558324 CXCL13O43927 109 aa10.7□□□□□ -0.7
HERC1-202ENST00000558324 PLGP00747 810 aaPredicted RBP10.7□□□□□ -0.7
HERC1-202ENST00000558324 POU2F1P14859 743 aa10.7□□□□□ -0.7
HERC1-202ENST00000558324 IL11P20809 199 aa10.7□□□□□ -0.7
HERC1-202ENST00000558324 PSMA4P25789 261 aaKnown RBP10.7□□□□□ -0.7
HERC1-202ENST00000558324 CCKARP32238 428 aa10.7□□□□□ -0.7
HERC1-202ENST00000558324 SFTPDP35247 375 aa10.7□□□□□ -0.7
HERC1-202ENST00000558324 CD79BP40259 229 aa10.7□□□□□ -0.7
HERC1-202ENST00000558324 CCR4P51679 360 aa10.7□□□□□ -0.7
HERC1-202ENST00000558324 NME5P56597 212 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms