RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 MEPEQ9NQ76 525 aaPredicted RBP13.18□□□□□ -0.3
SPG11-210ENST00000558319 HCSTQ9UBK5 93 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 COQ4Q9Y3A0 265 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 BOLA1Q9Y3E2 137 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 NAALAD2Q9Y3Q0 740 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 CITO14578 2027 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 SCAMP2O15127 329 aaKnown RBP13.18□□□□□ -0.3
SPG11-210ENST00000558319 B3GALNT1O75752 331 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 APOA2P02652 100 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 SLC35E2BP0CK96 405 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 BMP4P12644 408 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 HLA-DMAP28067 261 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 GPR143P51810 404 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 MPP7Q5T2T1 576 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 KBTBD6Q86V97 674 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 IL1F10Q8WWZ1 152 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 ACOT13Q9NPJ3 140 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 THSD1Q9NS62 852 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 CAMK2AQ9UQM7 478 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 A0A1W2PS29 197 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 C1GALT1C1LP0DN25 315 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 ZNF280AP59817 542 aaPredicted RBP13.18□□□□□ -0.3
SPG11-210ENST00000558319 ZNF551Q7Z340 670 aaPredicted RBP13.18□□□□□ -0.3
SPG11-210ENST00000558319 ZNF546Q86UE3 836 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 SPARTQ8N0X7 666 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 SVBPQ8N300 66 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 DCAF4L2Q8NA75 395 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 B3GNT2Q9NY97 397 aa13.18□□□□□ -0.3
SPG11-210ENST00000558319 A0A0B4J2A0 478 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 SYT7O43581 403 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 RD3LP0DJH9 198 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 GABRA2P47869 451 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 WNT4P56705 351 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 UBE2KP61086 200 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 SSX9Q7RTT3 188 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 OR9A2Q8NGT5 310 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 SMIM14Q96QK8 99 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 CRB3Q9BUF7 120 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 ANKRD60Q9BZ19 345 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 WASH6PQ9NQA3 447 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 C2orf42Q9NWW7 574 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 MKS1Q9NXB0 559 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 SHPKQ9UHJ6 478 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 ZNF736B4DX44 427 aaPredicted RBP13.17□□□□□ -0.3
SPG11-210ENST00000558319 EMC8O43402 210 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 FABP6P51161 128 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 CYCSP99999 105 aaKnown RBP13.17□□□□□ -0.3
SPG11-210ENST00000558319 MICAQ29983 383 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 ZNF783Q6ZMS7 281 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 LILRB3O75022 631 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 RRAS2P62070 204 aaPredicted RBP13.17□□□□□ -0.3
SPG11-210ENST00000558319 SH3BP2P78314 561 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 GAB1Q13480 694 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 ZNF169Q14929 603 aaPredicted RBP13.17□□□□□ -0.3
SPG11-210ENST00000558319 VASNQ6EMK4 673 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 LCN8Q6JVE9 175 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 MOAP1Q96BY2 351 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 G6PC3Q9BUM1 346 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 NAA50Q9GZZ1 169 aaKnown RBP13.17□□□□□ -0.3
SPG11-210ENST00000558319 PATZ1Q9HBE1 687 aaKnown RBP13.17□□□□□ -0.3
SPG11-210ENST00000558319 FBXL2Q9UKC9 423 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 M0R3H8 397 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 PPT1P50897 306 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 PAN3Q58A45 887 aaKnown RBP13.17□□□□□ -0.3
SPG11-210ENST00000558319 CST9LP1Q5W188 147 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 OR52N2Q8NGI0 321 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 GPR39O43194 453 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 ACTL6BO94805 426 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 GYPBP06028 91 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 DBHP09172 617 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 IQCF3P0C7M6 154 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 BPIP17213 487 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 HOXB9P17482 250 aaPredicted RBP13.17□□□□□ -0.3
SPG11-210ENST00000558319 PTAFRP25105 342 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 CASP3P42574 277 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 CTXN1P60606 82 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 CCDC71LQ8N9Z2 235 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 OR51Q1Q8NH59 317 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 SLC2A12Q8TD20 617 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 ZBTB8AQ96BR9 441 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 CNTNAP3Q9BZ76 1288 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 PLEKHJ1Q9NW61 149 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 HIF1ANQ9NWT6 349 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 RARRES3Q9UL19 164 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 UGT2A1Q9Y4X1 527 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 TMEM14AQ9Y6G1 99 aa13.17□□□□□ -0.3
SPG11-210ENST00000558319 DVL2O14641 736 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 FANCGO15287 622 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 ICMTO60725 284 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 SEMA4FO95754 770 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 LCATP04180 440 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 THBS2P35442 1172 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 OR7A5Q15622 319 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 NKAIN2Q5VXU1 208 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 TMEM19Q96HH6 336 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 LURAP1Q96LR2 239 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 METTL17Q9H7H0 456 aaPredicted RBP13.16□□□□□ -0.3
SPG11-210ENST00000558319 SFXN1Q9H9B4 322 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 HSPE1-MOB4S4R3N1 261 aa13.16□□□□□ -0.3
SPG11-210ENST00000558319 WASH4PA8MWX3 477 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms