RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 CDC42EP2O14613 210 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 ERI3O43414 337 aaKnown RBP11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 PLPP2O43688 288 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 OR7A10O76100 309 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 UBL3O95164 117 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 THY1P04216 161 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 H2AFB2P0C5Z0 115 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 HIST1H1TP22492 207 aaPredicted RBP11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 DNASE1P24855 282 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 MPIP34949 423 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 RAG2P55895 527 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 TAS2R43P59537 309 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 SRP54P61011 504 aaKnown RBP11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 RIPPLY1Q0D2K3 151 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 CLLU1Q5K131 121 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 GLRX5Q86SX6 157 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 LRRTM4Q86VH4 590 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 COMMD7Q86VX2 200 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 YIPF5Q969M3 257 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 NXPE2Q96DL1 559 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 C7orf50Q9BRJ6 194 aaKnown RBP11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 OR52D1Q9H346 318 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 MED20Q9H944 212 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 CACYBPQ9HB71 228 aaKnown RBP11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 POLMQ9NP87 494 aaPredicted RBP11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 UBQLN2Q9UHD9 624 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 SLC7A7Q9UM01 511 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 ZC3H12DA2A288 527 aaKnown RBP11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 GPR171O14626 319 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 AIFM1O95831 613 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 STATHP02808 62 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 CD3GP09693 182 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 SLC35G4P0C7Q5 338 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 SULT1A3P0DMM9 295 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 SULT1A4P0DMN0 295 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 ADRB3P13945 408 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 MC3RP41968 323 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 ZNF81P51508 661 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 MMP15P51511 669 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 SLC3A1Q07837 685 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 ZNF77Q15935 545 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 METRNLQ641Q3 311 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 FGD2Q7Z6J4 655 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 BPHLQ86WA6 291 aaPredicted RBP11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 FBXL6Q8N531 539 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 ACOT4Q8N9L9 421 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 OR6C4Q8NGE1 309 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 ADAMTS15Q8TE58 950 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 CXorf40AQ8TE69 158 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 PXYLP1Q8TE99 480 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 ZFPM2Q8WW38 1151 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 ELP4Q96EB1 424 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 RADILQ96JH8 1075 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 ACTR6Q9GZN1 396 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 NPFFR2Q9Y5X5 522 aa11.01□□□□□ -0.65
VIPAS39-211ENST00000557658 LRRN3E7EW58 273 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 SSNA1O43805 119 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 ZGLP1P0C6A0 271 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 RAB3BP20337 219 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 TBXA2RP21731 343 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 RAB14P61106 215 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 PRDX1Q06830 199 aaKnown RBP11□□□□□ -0.65
VIPAS39-211ENST00000557658 CAMK2DQ13557 499 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 EXOSC2Q13868 293 aaKnown RBP11□□□□□ -0.65
VIPAS39-211ENST00000557658 GRK1Q15835 563 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 GSG1Q2KHT4 349 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 SLC25A35Q3KQZ1 300 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 LGALSLQ3ZCW2 172 aaPredicted RBP11□□□□□ -0.65
VIPAS39-211ENST00000557658 PRPF38BQ5VTL8 546 aaKnown RBP11□□□□□ -0.65
VIPAS39-211ENST00000557658 MRM1Q6IN84 353 aaKnown RBP11□□□□□ -0.65
VIPAS39-211ENST00000557658 SLC48A1Q6P1K1 146 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 CNKSR3Q6P9H4 555 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 BTN2A1Q7KYR7 527 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 PIAS4Q8N2W9 510 aaPredicted RBP11□□□□□ -0.65
VIPAS39-211ENST00000557658 LSMEM1Q8N8F7 131 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 LINC01555Q8NAE3 123 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 FANK1Q8TC84 345 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 WFIKKN2Q8TEU8 576 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 OR8D1Q8WZ84 308 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 OTUB2Q96DC9 234 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 ACTRT3Q9BYD9 372 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 TMEM168Q9H0V1 697 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 ZBP1Q9H171 429 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 LRRN3Q9H3W5 708 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 SCP2D1Q9UJQ7 156 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 ZNF443Q9Y2A4 671 aaPredicted RBP11□□□□□ -0.65
VIPAS39-211ENST00000557658 TMEM5Q9Y2B1 443 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 RPS10-NUDT3A0A1W2PQS6 291 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 SLC22A31A6NKX4 558 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 E9PI62 339 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 FCMRO60667 390 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 SCO1O75880 301 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 UBL4AP11441 157 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 F3P13726 295 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 UGT2B7P16662 529 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 BMP7P18075 431 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 ATP5A1P25705 553 aaKnown RBP11□□□□□ -0.65
VIPAS39-211ENST00000557658 PPM1AP35813 382 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 PDX1P52945 283 aa11□□□□□ -0.65
VIPAS39-211ENST00000557658 STXBP1P61764 594 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms