RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 C4orf22Q6V702 233 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SYVN1Q86TM6 617 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 FAM71AQ8IYT1 594 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ENTHD1Q8IYW4 607 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 FGFRL1Q8N441 504 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 EIF1ADQ8N9N8 165 aaKnown RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ADAD2Q8NCV1 583 aaKnown RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 OR2T3Q8NH03 318 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 MRGPRFQ96AM1 343 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 C2orf48Q96LS8 159 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 NECTIN4Q96NY8 510 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 TSC22D3Q99576 134 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 MTG1Q9BT17 334 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 TRIM15Q9C019 465 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 FAM107BQ9H098 131 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 TOLLIPQ9H0E2 274 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 COQ10BQ9H8M1 238 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 MARCH7Q9H992 704 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 RPF1Q9H9Y2 349 aaKnown RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 NMUR1Q9HB89 426 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SLC38A10Q9HBR0 1119 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 MYOZ1Q9NP98 299 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 BICRAQ9NZM4 1560 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 AKAP7Q9P0M2 348 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 CLEC2DQ9UHP7 191 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SMPXQ9UHP9 88 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 AURKCQ9UQB9 309 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 TNNQ9UQP3 1299 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 L3MBTL1Q9Y468 752 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 POLA1P09884 1462 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 MSH6P52701 1360 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 EIF3AQ14152 1382 aaKnown RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 MYH7P12883 1935 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 IGHV3-38A0A0C4DH36 116 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SMCO2A6NFE2 343 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SIGLEC16A6NMB1 481 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 H0YCG3 227 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 H3BQF6 201 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SGK494L7N484 410 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 CCL24O00175 119 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 PGRMC1O00264 195 aaKnown RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SSX5O60225 188 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 EIF1BO60739 113 aaKnown RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 CABYRO75952 493 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 UFL1O94874 794 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 AHSA1O95433 338 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 CPNE6O95741 557 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 MT-ND2P03891 347 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ALPPP05187 535 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ALPPL2P10696 532 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 IGFBP5P24593 272 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 PPP2R1AP30153 589 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 LCN1P31025 176 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 GPR183P32249 361 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 EIF1P41567 113 aaKnown RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 PRKCIP41743 596 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 CRATP43155 626 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 TSFMP43897 325 aaKnown RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ABCE1P61221 599 aaKnown RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ATP6V0D1P61421 351 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 FOLH1Q04609 750 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 CDH17Q12864 832 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 CDH18Q13634 790 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SPHARQ15513 63 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 MAPK6Q16659 721 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 MRGPRG-AS1Q2M3A8 158 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 BCL7AQ4VC05 210 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ATAD3BQ5T9A4 648 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 MFSD14CQ5VZR4 134 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 PWWP2BQ6NUJ5 590 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 CES3Q6UWW8 571 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 Q6ZVQ6 151 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 EFL1Q7Z2Z2 1120 aaKnown RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 CACUL1Q86Y37 369 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 HPS6Q86YV9 775 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 CEP112Q8N8E3 955 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 MAPK1IP1LQ8NDC0 245 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF248Q8NDW4 579 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 GPRC5AQ8NFJ5 357 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 FNDC8Q8TC99 324 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 LKAAEAR1Q8TD35 194 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 MCOLN3Q8TDD5 553 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ULK4Q96C45 1275 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SLC25A36Q96CQ1 311 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 OTUB2Q96DC9 234 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SLC41A3Q96GZ6 507 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 ALKBH3Q96Q83 286 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 VPS35Q96QK1 796 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SYT15Q9BQS2 421 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SLC5A7Q9GZV3 580 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 OR51B6Q9H340 312 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 RNF41Q9H4P4 317 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 SCRT2Q9NQ03 307 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 FAM212BQ9NTI7 297 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 AGPAT5Q9NUQ2 364 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 RMND1Q9NWS8 449 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 MRPL39Q9NYK5 338 aaKnown RBP1.43□□□□□ -2.18
HIF1A-212ENST00000557538 GTSE1Q9NYZ3 720 aa1.43□□□□□ -2.18
HIF1A-212ENST00000557538 PTTG2Q9NZH5 202 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms