RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 TBC1D3GQ6DHY5 549 aa15.17■□□□□ 0.02
SHMT2-231ENST00000557433 TMCO2Q7Z6W1 182 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-231ENST00000557433 SAMD14Q8IZD0 417 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-231ENST00000557433 LNX2Q8N448 690 aa15.17■□□□□ 0.02
SHMT2-231ENST00000557433 HDDC3Q8N4P3 179 aa15.17■□□□□ 0.02
SHMT2-231ENST00000557433 ADAMTS15Q8TE58 950 aa15.17■□□□□ 0.02
SHMT2-231ENST00000557433 AICDAQ9GZX7 198 aa15.17■□□□□ 0.02
SHMT2-231ENST00000557433 ERVMER34-1Q9H9K5 563 aa15.17■□□□□ 0.02
SHMT2-231ENST00000557433 HCFC1R1Q9NWW0 138 aa15.17■□□□□ 0.02
SHMT2-231ENST00000557433 SLC23A2Q9UGH3 650 aa15.17■□□□□ 0.02
SHMT2-231ENST00000557433 ZNF443Q9Y2A4 671 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-231ENST00000557433 ATG4BQ9Y4P1 393 aa15.17■□□□□ 0.02
SHMT2-231ENST00000557433 IRAK3Q9Y616 596 aa15.17■□□□□ 0.02
SHMT2-231ENST00000557433 ZNF780BQ9Y6R6 833 aa15.17■□□□□ 0.02
SHMT2-231ENST00000557433 LRRK1Q38SD2 2015 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 MEIKINA0A087WXM9 373 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 A0A0G2JK05 382 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 PGRMC2O15173 223 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 ERI3O43414 337 aaKnown RBP15.16■□□□□ 0.02
SHMT2-231ENST00000557433 TMEM127O75204 238 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 RCBTB2O95199 551 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 CXCL14O95715 111 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 PDGFAP04085 211 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 THBS1P07996 1170 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 TFPIP10646 304 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 BMP7P18075 431 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 C4BPBP20851 252 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 SHC1P29353 583 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 PLBD1Q6P4A8 553 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 BTN2A1Q7KYR7 527 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 KRT74Q7RTS7 529 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 HMGN2P46Q86SG4 172 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 RANBP3LQ86VV4 465 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-231ENST00000557433 SLC43A2Q8N370 569 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 ZNF366Q8N895 744 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 LINC01555Q8NAE3 123 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 OR2L8Q8NGY9 312 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 OR8K5Q8NH50 307 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 ABHD4Q8TB40 342 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 CD99L2Q8TCZ2 262 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 ABHD1Q96SE0 405 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 CD180Q99467 661 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 TIMP4Q99727 224 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 OR52D1Q9H346 318 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 SLCO1C1Q9NYB5 712 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 SCP2D1Q9UJQ7 156 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 TMEM5Q9Y2B1 443 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 CKAP5Q14008 2032 aa15.16■□□□□ 0.02
SHMT2-231ENST00000557433 A0A0G2JN53 185 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 LRRN3E7EW58 273 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 BHLHE40O14503 412 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 FRS3O43559 492 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 TSC22D2O75157 780 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 SULT1A3P0DMM9 295 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 SULT1A4P0DMN0 295 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 ADH5P11766 374 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 HOXD11P31277 338 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-231ENST00000557433 NRG3P56975 720 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 ERVK-21P61565 698 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 POU4F2Q12837 409 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 UAP1L1Q3KQV9 507 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 PUS10Q3MIT2 529 aaKnown RBP15.15■□□□□ 0.02
SHMT2-231ENST00000557433 CEACAM19Q7Z692 300 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 OR2A1Q8NGT9 310 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 OR56B4Q8NH76 319 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 FANK1Q8TC84 345 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 TMEM255BQ8WV15 326 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 MAP6Q96JE9 813 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 HS6ST2Q96MM7 605 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 ZNF681Q96N22 645 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 TMEM168Q9H0V1 697 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 LRRN3Q9H3W5 708 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 EVA1AQ9H8M9 152 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 HEXA-AS1Q9H8Q6 139 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 CMC2Q9NRP2 79 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 HAO2Q9NYQ3 351 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 BAIAP2Q9UQB8 552 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 SIRT4Q9Y6E7 314 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-231ENST00000557433 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 IGKV1-8A0A0C4DH67 115 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 A0A1B0GTQ1 180 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 TRAPPC13A5PLN9 417 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 SLC9B1P1A6NJY1 282 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 GLOD5A6NK44 160 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 HYAL3O43820 417 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-231ENST00000557433 SLC2A10O95528 541 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 ADH1CP00326 375 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 THY1P04216 161 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 WEE1P30291 646 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 BCL6P41182 706 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 MC3RP41968 323 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 CDK3Q00526 305 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 GPR139Q6DWJ6 353 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 ARL9Q6T311 187 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 NRROSQ86YC3 692 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 LRRC20Q8TCA0 184 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 HAVCR2Q8TDQ0 301 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 KLK6Q92876 244 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 YIPF5Q969M3 257 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 GIMAP5Q96F15 307 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms